Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680675
Identifier: 182680675
GI number: 182680675
Start: 141563
End: 142660
Strand: Direct
Name: 182680675
Synonym: XfasM23_0104
Alternate gene names: NA
Gene position: 141563-142660 (Clockwise)
Preceding gene: 182680674
Following gene: 182680677
Centisome position: 5.58
GC content: 36.25
Gene sequence:
>1098_bases GTGGCTGTTTCGCATTTTGTGGCTGCTTTTTTGCCATCAATGCTTCATAAAAATTACCCGTCAATTTTTGCAAAAAATCA TCATCCTAGTGGGTTGTTCGATGTTCTTACATCCCCAATGGTGAGCATTTTTTATAACGGACATTTTGCTGTTCTTATCT TCTTTGTGTTGTCTGGCTATGTGTTAACGATGCCATATTACAATCAAGATGAATCAAGCGGAGTTTTAAGTAAAAGACTG TGGGGGCGTTATCTTAGACTGAATATACCGATCTTTTTTGCCATTTCAATATCGTATGTTGTTTATGTATCGGGTCTTTA TTTGAATGTGCATGCGGCGGATATGTCTGGGTCCACTGAATGGTTAAAGAATTTCTTTCCTAGTGGGATTTTGCTATCGG ATGCTGTTAAAGAGTCTGTATTCCAATCTATTATTTTTGGGAATAGTGCTCTTATTCCTCCTCTTTGGACCTTGAAAATC GAGTTTATTGGCTCTTTGTATGTGTTGCTTTTTTATATTTCGAAGCCAAAACGTTACACTTTTTTATCAGCATTGATGGT TCTTCTGTTGATATATGTGATACACAGGCAGGATTCAATATACTTCTACGCTATTTTTCTTGGCTCTTTTTTGAATGAGC TAAAGAAGTCATCAAGATTGAGGGCGGTATTCTTTTTTATCGGTTTCTATTTTGGGGGCTTCCAGTTCGAAAATTCGATC TACAATTTTCTTCCTCGAGTTATGGTTGGTGATTTGGAGGTGTGGGATAAGAAGACGTTTTACAACTTGATCGGAGCTTG TTTTATTACAGCATCAGTTGTTCAAGGGTTTGGTGAAAAAATACTTCAATGGCGCATTACTCAATTTTTTGGTGGCATTT CTTTTTCTCTTTATTTGCTTCATTTTGTAATACTTTGTTCTCTTTCATCGTATGTGTATGTCAGTCTCTCTATGGGAAAG GCATCTTTGTTGGTTAATTTTGCTTGTTATGTGTTGGTGTGTGTTCTGGTGTCTTTTATTTTTGAGAAATACATAGATAA GCCGTCGATTAGTATTGCGCATAAGTTTTCTAAGAAGATATTTAGTAAGCAGGTGTAA
Upstream 100 bases:
>100_bases AGTAATAGCGATGATTTAGAATTTTAAATGTTATTTTCACAAGGATTTGTTTATGAAAAACAGGAGTGTTGATGGGCTTC GAGGGATAGCGGCTTTTAAT
Downstream 100 bases:
>100_bases TGTTTGTTGTTATCTTATTTTTTTGATGACCGTTTGAGAGTGTGTGGAAGCAATGGTGTTTTCTTTGCTTTCTGAGTGTT CTGTAATTGGGGCGGGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAVSHFVAAFLPSMLHKNYPSIFAKNHHPSGLFDVLTSPMVSIFYNGHFAVLIFFVLSGYVLTMPYYNQDESSGVLSKRL WGRYLRLNIPIFFAISISYVVYVSGLYLNVHAADMSGSTEWLKNFFPSGILLSDAVKESVFQSIIFGNSALIPPLWTLKI EFIGSLYVLLFYISKPKRYTFLSALMVLLLIYVIHRQDSIYFYAIFLGSFLNELKKSSRLRAVFFFIGFYFGGFQFENSI YNFLPRVMVGDLEVWDKKTFYNLIGACFITASVVQGFGEKILQWRITQFFGGISFSLYLLHFVILCSLSSYVYVSLSMGK ASLLVNFACYVLVCVLVSFIFEKYIDKPSISIAHKFSKKIFSKQV
Sequences:
>Translated_365_residues MAVSHFVAAFLPSMLHKNYPSIFAKNHHPSGLFDVLTSPMVSIFYNGHFAVLIFFVLSGYVLTMPYYNQDESSGVLSKRL WGRYLRLNIPIFFAISISYVVYVSGLYLNVHAADMSGSTEWLKNFFPSGILLSDAVKESVFQSIIFGNSALIPPLWTLKI EFIGSLYVLLFYISKPKRYTFLSALMVLLLIYVIHRQDSIYFYAIFLGSFLNELKKSSRLRAVFFFIGFYFGGFQFENSI YNFLPRVMVGDLEVWDKKTFYNLIGACFITASVVQGFGEKILQWRITQFFGGISFSLYLLHFVILCSLSSYVYVSLSMGK ASLLVNFACYVLVCVLVSFIFEKYIDKPSISIAHKFSKKIFSKQV >Mature_364_residues AVSHFVAAFLPSMLHKNYPSIFAKNHHPSGLFDVLTSPMVSIFYNGHFAVLIFFVLSGYVLTMPYYNQDESSGVLSKRLW GRYLRLNIPIFFAISISYVVYVSGLYLNVHAADMSGSTEWLKNFFPSGILLSDAVKESVFQSIIFGNSALIPPLWTLKIE FIGSLYVLLFYISKPKRYTFLSALMVLLLIYVIHRQDSIYFYAIFLGSFLNELKKSSRLRAVFFFIGFYFGGFQFENSIY NFLPRVMVGDLEVWDKKTFYNLIGACFITASVVQGFGEKILQWRITQFFGGISFSLYLLHFVILCSLSSYVYVSLSMGKA SLLVNFACYVLVCVLVSFIFEKYIDKPSISIAHKFSKKIFSKQV
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41728; Mature: 41596
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSHFVAAFLPSMLHKNYPSIFAKNHHPSGLFDVLTSPMVSIFYNGHFAVLIFFVLSGY CCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VLTMPYYNQDESSGVLSKRLWGRYLRLNIPIFFAISISYVVYVSGLYLNVHAADMSGSTE EEECCCCCCCCCCCHHHHHHHHHHEEECCCEEEHHHHHHHHHHHHHEEEEEECCCCCCHH WLKNFFPSGILLSDAVKESVFQSIIFGNSALIPPLWTLKIEFIGSLYVLLFYISKPKRYT HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH FLSALMVLLLIYVIHRQDSIYFYAIFLGSFLNELKKSSRLRAVFFFIGFYFGGFQFENSI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YNFLPRVMVGDLEVWDKKTFYNLIGACFITASVVQGFGEKILQWRITQFFGGISFSLYLL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HFVILCSLSSYVYVSLSMGKASLLVNFACYVLVCVLVSFIFEKYIDKPSISIAHKFSKKI HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FSKQV HHCCC >Mature Secondary Structure AVSHFVAAFLPSMLHKNYPSIFAKNHHPSGLFDVLTSPMVSIFYNGHFAVLIFFVLSGY CHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VLTMPYYNQDESSGVLSKRLWGRYLRLNIPIFFAISISYVVYVSGLYLNVHAADMSGSTE EEECCCCCCCCCCCHHHHHHHHHHEEECCCEEEHHHHHHHHHHHHHEEEEEECCCCCCHH WLKNFFPSGILLSDAVKESVFQSIIFGNSALIPPLWTLKIEFIGSLYVLLFYISKPKRYT HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH FLSALMVLLLIYVIHRQDSIYFYAIFLGSFLNELKKSSRLRAVFFFIGFYFGGFQFENSI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YNFLPRVMVGDLEVWDKKTFYNLIGACFITASVVQGFGEKILQWRITQFFGGISFSLYLL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HFVILCSLSSYVYVSLSMGKASLLVNFACYVLVCVLVSFIFEKYIDKPSISIAHKFSKKI HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FSKQV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA