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The map label for this gene is copB [H]

Identifier: 182680664

GI number: 182680664

Start: 129326

End: 130270

Strand: Direct

Name: copB [H]

Synonym: XfasM23_0093

Alternate gene names: 182680664

Gene position: 129326-130270 (Clockwise)

Preceding gene: 182680663

Following gene: 182680670

Centisome position: 5.1

GC content: 60.11

Gene sequence:

>945_bases
ATGAACACCCGTACCTGGTTCGTATTGTTCTGCGTCGCTCTGCCACTCGTACCGCTGCAAGCGCAGCCGCGCCCGCAGAC
CGAACAGACATCACCGGCGTTGAGTGAGCACACCCAGATGGATCACACCCAGATGGATCACACCCAGATGGATCACACAG
GGATGGATCACACAGGGATGGATCACACAGGGATGGATCACACAGGGATGGATCATGCGATCCACGGTGCAACAACGCGA
TCTGCCGGAGATGTTGCCTTACCCCCGCCCACCACGGCGGCGTTGGCAGCGGCGTTTCCTCCGTTACGCCACCGTGCTGC
GCACGCGCCACCCCTGGTGTCTCTGGTCCGTATTGATCGGTTGGAAACGTGGAATGCTGATCCCGGGCGCGGCCACGCTT
GGGCAACGCAGGCATGGATTGGCAGCGACATTCAACGGCTGTGGTTACGTAGCCAAGGTGAGTGTTACGGTGGTCGATGC
CAATCTGTCGCAGTGGATATGCTGTATGGGCACGATATTTCGCCCTGGTGGGATGCTCTCATTGGCGCGCGCCGCGATGT
GCAGCCGGATGGCCGCACCTGGGCGGCGCTTGGTGTGCAGGGCGTGACCCCGTATAAATTTGAGAGTGCCGCGTTTCTGT
ATTTGAGCGGTGCTGCGATGCGGCTCATGGTGGAGACTAAATATGACCTGCTACTCAGTCAGCGGTTGATCCTGCAACCG
AACCTCCAAGCGACCGCTGGTCTTACTCGGGATCGCGATCTGGGGGCCGGACCCCAAACGTTACAGGTTGGCGTGCGGAT
GCGTTACCAGATCACCCGGCGTGTTGCACCGTATGTGGGTTGGGAGCGCGAATATGGTTATGGGGGGAATGGGCGCCAGG
CACGCGGGCGTGGTACCTCTGACGATGAAAAGCGCTGGGTGGCTGGGATACGCTGCTGGTTTTGA

Upstream 100 bases:

>100_bases
GCTACCGTGTGCGTGCCGATGCACTGGGGCGCTGGGCCTACCACTGCCACATGCTGTACCACATGGAAAGCGGCATGATG
CGTGAAGTACAGGTGCGCCC

Downstream 100 bases:

>100_bases
ACGTTCCTGACCAGTGAAGCATCACAACTGATGATGTGCCTTAGATCGCGTGATGGATTGCATGATCCAGGGTTCCCATC
TCAACGGTGTGAACCCTGGA

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNTRTWFVLFCVALPLVPLQAQPRPQTEQTSPALSEHTQMDHTQMDHTQMDHTGMDHTGMDHTGMDHTGMDHAIHGATTR
SAGDVALPPPTTAALAAAFPPLRHRAAHAPPLVSLVRIDRLETWNADPGRGHAWATQAWIGSDIQRLWLRSQGECYGGRC
QSVAVDMLYGHDISPWWDALIGARRDVQPDGRTWAALGVQGVTPYKFESAAFLYLSGAAMRLMVETKYDLLLSQRLILQP
NLQATAGLTRDRDLGAGPQTLQVGVRMRYQITRRVAPYVGWEREYGYGGNGRQARGRGTSDDEKRWVAGIRCWF

Sequences:

>Translated_314_residues
MNTRTWFVLFCVALPLVPLQAQPRPQTEQTSPALSEHTQMDHTQMDHTQMDHTGMDHTGMDHTGMDHTGMDHAIHGATTR
SAGDVALPPPTTAALAAAFPPLRHRAAHAPPLVSLVRIDRLETWNADPGRGHAWATQAWIGSDIQRLWLRSQGECYGGRC
QSVAVDMLYGHDISPWWDALIGARRDVQPDGRTWAALGVQGVTPYKFESAAFLYLSGAAMRLMVETKYDLLLSQRLILQP
NLQATAGLTRDRDLGAGPQTLQVGVRMRYQITRRVAPYVGWEREYGYGGNGRQARGRGTSDDEKRWVAGIRCWF
>Mature_314_residues
MNTRTWFVLFCVALPLVPLQAQPRPQTEQTSPALSEHTQMDHTQMDHTQMDHTGMDHTGMDHTGMDHTGMDHAIHGATTR
SAGDVALPPPTTAALAAAFPPLRHRAAHAPPLVSLVRIDRLETWNADPGRGHAWATQAWIGSDIQRLWLRSQGECYGGRC
QSVAVDMLYGHDISPWWDALIGARRDVQPDGRTWAALGVQGVTPYKFESAAFLYLSGAAMRLMVETKYDLLLSQRLILQP
NLQATAGLTRDRDLGAGPQTLQVGVRMRYQITRRVAPYVGWEREYGYGGNGRQARGRGTSDDEKRWVAGIRCWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 34962; Mature: 34962

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRTWFVLFCVALPLVPLQAQPRPQTEQTSPALSEHTQMDHTQMDHTQMDHTGMDHTGM
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCC
DHTGMDHTGMDHAIHGATTRSAGDVALPPPTTAALAAAFPPLRHRAAHAPPLVSLVRIDR
CCCCCCCCCCCHHHCCCCCCCCCCEECCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHHH
LETWNADPGRGHAWATQAWIGSDIQRLWLRSQGECYGGRCQSVAVDMLYGHDISPWWDAL
HHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEHHCCCCCCHHHHHH
IGARRDVQPDGRTWAALGVQGVTPYKFESAAFLYLSGAAMRLMVETKYDLLLSQRLILQP
HCCCCCCCCCCCEEEEECCCCCCCCEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCC
NLQATAGLTRDRDLGAGPQTLQVGVRMRYQITRRVAPYVGWEREYGYGGNGRQARGRGTS
CCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDEKRWVAGIRCWF
CHHHHHHHHEEECC
>Mature Secondary Structure
MNTRTWFVLFCVALPLVPLQAQPRPQTEQTSPALSEHTQMDHTQMDHTQMDHTGMDHTGM
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCC
DHTGMDHTGMDHAIHGATTRSAGDVALPPPTTAALAAAFPPLRHRAAHAPPLVSLVRIDR
CCCCCCCCCCCHHHCCCCCCCCCCEECCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHHH
LETWNADPGRGHAWATQAWIGSDIQRLWLRSQGECYGGRCQSVAVDMLYGHDISPWWDAL
HHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEHHCCCCCCHHHHHH
IGARRDVQPDGRTWAALGVQGVTPYKFESAAFLYLSGAAMRLMVETKYDLLLSQRLILQP
HCCCCCCCCCCCEEEEECCCCCCCCEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCC
NLQATAGLTRDRDLGAGPQTLQVGVRMRYQITRRVAPYVGWEREYGYGGNGRQARGRGTS
CCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDEKRWVAGIRCWF
CHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]