Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680662
Identifier: 182680662
GI number: 182680662
Start: 126867
End: 127409
Strand: Direct
Name: 182680662
Synonym: XfasM23_0091
Alternate gene names: NA
Gene position: 126867-127409 (Clockwise)
Preceding gene: 182680659
Following gene: 182680663
Centisome position: 5.0
GC content: 58.56
Gene sequence:
>543_bases GTGCCCCTCCGATGGCAGCACCGCCTGATTGAACAGGAACCTCGTGTCCTTGGCATCGCCACCTGGCGCACTTGTAAAAA TGCGCTGAGCGTTGCATCTGCAGGCATCAATCTTGGCGTGTCATCACCGTATACTGATGCCACTTCACGATTGCGTTGTA CTCCCTTGCCATCTTTACTACTACGTCTGTTGATCAGCCTTTGCTTGATTGCTCAGCAGTCTGTGAGTGCTTGGGCGTCG GTCACGATGCCCCCAAGGATTGCCCTGCCTTCTATGCCTGTCGCCGTGGTCGACAGGCCCTGTCACCATACCGGCGTTTC TGGCGTTCAGAGTGCAGCACACCTCAGCCATGCCATACCCACACCCTCAACCCCATGCAGCAAAATCGGTCATTGTGACT GCTTGCAGCACAGCAACGCCCTGCCGGTGACGCTCCTCATCCTGCCGGTCGTGTTGCTGGAGCGTATGCCCCCGCTTGCC GGAATACTGACTAGCCGGGGACTCCCCGCCCCCTATCGTCCCATGCGGCCTCCCATTGCCTGA
Upstream 100 bases:
>100_bases GCACTCCTGACCAGAAACCTCTCCTGCTTGTCTTCCATCCCCAGCCCGATGCGAGACCTCTTCCTGAATGATGCTACTGC ACTGCCCACCCTGACCGGCA
Downstream 100 bases:
>100_bases GTCCCTGAGGGATGTTTCCTGTCCCCCATAGCGCACCTCCTCCGTATTCCCCTTGCTTGCTATCGTTCCGTCGCCAAAGC GCCGGACATGGGAGTCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPLRWQHRLIEQEPRVLGIATWRTCKNALSVASAGINLGVSSPYTDATSRLRCTPLPSLLLRLLISLCLIAQQSVSAWAS VTMPPRIALPSMPVAVVDRPCHHTGVSGVQSAAHLSHAIPTPSTPCSKIGHCDCLQHSNALPVTLLILPVVLLERMPPLA GILTSRGLPAPYRPMRPPIA
Sequences:
>Translated_180_residues MPLRWQHRLIEQEPRVLGIATWRTCKNALSVASAGINLGVSSPYTDATSRLRCTPLPSLLLRLLISLCLIAQQSVSAWAS VTMPPRIALPSMPVAVVDRPCHHTGVSGVQSAAHLSHAIPTPSTPCSKIGHCDCLQHSNALPVTLLILPVVLLERMPPLA GILTSRGLPAPYRPMRPPIA >Mature_179_residues PLRWQHRLIEQEPRVLGIATWRTCKNALSVASAGINLGVSSPYTDATSRLRCTPLPSLLLRLLISLCLIAQQSVSAWASV TMPPRIALPSMPVAVVDRPCHHTGVSGVQSAAHLSHAIPTPSTPCSKIGHCDCLQHSNALPVTLLILPVVLLERMPPLAG ILTSRGLPAPYRPMRPPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19328; Mature: 19197
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRWQHRLIEQEPRVLGIATWRTCKNALSVASAGINLGVSSPYTDATSRLRCTPLPSLL CCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCEECCCHHHHH LRLLISLCLIAQQSVSAWASVTMPPRIALPSMPVAVVDRPCHHTGVSGVQSAAHLSHAIP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCC TPSTPCSKIGHCDCLQHSNALPVTLLILPVVLLERMPPLAGILTSRGLPAPYRPMRPPIA CCCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PLRWQHRLIEQEPRVLGIATWRTCKNALSVASAGINLGVSSPYTDATSRLRCTPLPSLL CCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCEECCCHHHHH LRLLISLCLIAQQSVSAWASVTMPPRIALPSMPVAVVDRPCHHTGVSGVQSAAHLSHAIP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCC TPSTPCSKIGHCDCLQHSNALPVTLLILPVVLLERMPPLAGILTSRGLPAPYRPMRPPIA CCCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA