Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yffB [H]
Identifier: 182680651
GI number: 182680651
Start: 109478
End: 109834
Strand: Direct
Name: yffB [H]
Synonym: XfasM23_0080
Alternate gene names: 182680651
Gene position: 109478-109834 (Clockwise)
Preceding gene: 182680650
Following gene: 182680652
Centisome position: 4.32
GC content: 47.9
Gene sequence:
>357_bases ATGACCACACTTTATGGATTGAAAAACTGCGATACCTGCAAGAAGGCGAATAAATGGCTGGATCGCTTCAGCATCGCTTA CGTTTTTGTTGACTACTGTGAGAATATACCGTCACCGGAGACGTTGGTTACATGGTCAAAAGAGGCCGGCAGCTTCGACG CGCTCATTAACAAATCTTCAACCACATGGCGCCAGTTACCGAGCAATCGCAAAACACCCTGTAGCGAAGCAGAATGGAAA CTGTTGCTGCGGGAATATCCACATTTGATCCGGCGGCCTGTGGTCCTAACCAGTGATGGCATCTTCAGTCAAGGGTTTAG CGACAATGGATTCAAGAAGCGTTTTGGGATCGATTGA
Upstream 100 bases:
>100_bases ACTGCGCGGTGATTGTCAAGCAGGTGGACGAAAAAACACGTGCCAAGACCAGTATCAACGAGCTTCTGCGTGGTTTGGCA GATTGATTGGAATAATACAT
Downstream 100 bases:
>100_bases GGAATGATTCCATTCGGTGGTTATGTGCTGCTTTCTCTTGAGTAATACTTAAGAGGGAATTTTTTTGATTCAGTCAGGGG TTTCACAAATATCCCAAAAG
Product: arsenate reductase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTTLYGLKNCDTCKKANKWLDRFSIAYVFVDYCENIPSPETLVTWSKEAGSFDALINKSSTTWRQLPSNRKTPCSEAEWK LLLREYPHLIRRPVVLTSDGIFSQGFSDNGFKKRFGID
Sequences:
>Translated_118_residues MTTLYGLKNCDTCKKANKWLDRFSIAYVFVDYCENIPSPETLVTWSKEAGSFDALINKSSTTWRQLPSNRKTPCSEAEWK LLLREYPHLIRRPVVLTSDGIFSQGFSDNGFKKRFGID >Mature_117_residues TTLYGLKNCDTCKKANKWLDRFSIAYVFVDYCENIPSPETLVTWSKEAGSFDALINKSSTTWRQLPSNRKTPCSEAEWKL LLREYPHLIRRPVVLTSDGIFSQGFSDNGFKKRFGID
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=116, Percent_Identity=38.7931034482759, Blast_Score=78, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13591; Mature: 13459
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLYGLKNCDTCKKANKWLDRFSIAYVFVDYCENIPSPETLVTWSKEAGSFDALINKSS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCC TTWRQLPSNRKTPCSEAEWKLLLREYPHLIRRPVVLTSDGIFSQGFSDNGFKKRFGID CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTLYGLKNCDTCKKANKWLDRFSIAYVFVDYCENIPSPETLVTWSKEAGSFDALINKSS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCC TTWRQLPSNRKTPCSEAEWKLLLREYPHLIRRPVVLTSDGIFSQGFSDNGFKKRFGID CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]