Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680620
Identifier: 182680620
GI number: 182680620
Start: 74694
End: 75065
Strand: Direct
Name: 182680620
Synonym: XfasM23_0048
Alternate gene names: NA
Gene position: 74694-75065 (Clockwise)
Preceding gene: 182680619
Following gene: 182680621
Centisome position: 2.95
GC content: 45.16
Gene sequence:
>372_bases GTGACTGATTGTTCTCACAGTACGTTCACTACAGATGTTATCAAGCACCAAGTGATCAGTTTGTACGTATTACTGTCGGA ACTGGCCGATTATCTATCTGTGTCTATTATGGCTACCGTGCTGTTGTTCCTTGCAGGTGGGAATTATATGGCTGTGTCTT CCCAAAGTGGCATTGTTGATCACCTGGATCGAGAATTGCTCTTTGATCTGCCCAGCAACATATGCAAAATGGCTATCACA CATGTACTACCCTTAGAGTCTGTACCCGGTGCAATGTGGTTCCATCACGGAGATAGCCCAGCACATATACCGCTTGAATC CTTGGCCATGAGTACGAATTTAGTCGTAGCAAACGACTGTGTTGCTGAGTAA
Upstream 100 bases:
>100_bases AGCATTAATTTTTTTCTTATCCTGCAATTCCTGCAATGCTGCATGAGGCATTCGCAGTTGAGATGTCCGACATCAGTACA CCAGCGATGCTGGATTATAA
Downstream 100 bases:
>100_bases ACCGAGGCAGCGCAGATGCAATGATGTAAGGGGGCTGTTACGATGAAATTAATTTTATGTAATGGAGTGCAAGCTAATGT TACGCAACTCGCTGCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTDCSHSTFTTDVIKHQVISLYVLLSELADYLSVSIMATVLLFLAGGNYMAVSSQSGIVDHLDRELLFDLPSNICKMAIT HVLPLESVPGAMWFHHGDSPAHIPLESLAMSTNLVVANDCVAE
Sequences:
>Translated_123_residues MTDCSHSTFTTDVIKHQVISLYVLLSELADYLSVSIMATVLLFLAGGNYMAVSSQSGIVDHLDRELLFDLPSNICKMAIT HVLPLESVPGAMWFHHGDSPAHIPLESLAMSTNLVVANDCVAE >Mature_122_residues TDCSHSTFTTDVIKHQVISLYVLLSELADYLSVSIMATVLLFLAGGNYMAVSSQSGIVDHLDRELLFDLPSNICKMAITH VLPLESVPGAMWFHHGDSPAHIPLESLAMSTNLVVANDCVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13345; Mature: 13213
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDCSHSTFTTDVIKHQVISLYVLLSELADYLSVSIMATVLLFLAGGNYMAVSSQSGIVD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH HLDRELLFDLPSNICKMAITHVLPLESVPGAMWFHHGDSPAHIPLESLAMSTNLVVANDC HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCEEECCCC VAE CCC >Mature Secondary Structure TDCSHSTFTTDVIKHQVISLYVLLSELADYLSVSIMATVLLFLAGGNYMAVSSQSGIVD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH HLDRELLFDLPSNICKMAITHVLPLESVPGAMWFHHGDSPAHIPLESLAMSTNLVVANDC HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCEEECCCC VAE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA