Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680600
Identifier: 182680600
GI number: 182680600
Start: 36187
End: 37446
Strand: Direct
Name: 182680600
Synonym: XfasM23_0028
Alternate gene names: NA
Gene position: 36187-37446 (Clockwise)
Preceding gene: 182680598
Following gene: 182680601
Centisome position: 1.43
GC content: 53.33
Gene sequence:
>1260_bases ATGACACTGACGGCTATTCAATTGATCGGCGCTCTTCTATTCGCCGTCGCCATTTTGCACACGTTTGCGACGAAGTTCTT TGAGCGTTTGAGCCATACCCATCCGACACATGCTGGGTTGTGGCATTTGCTCGGTGAAGTTGAGGTGGTGTTTGGTTTCT GGGCGTTGGTGTTGGTTGTGGCGATGTGTGTCACGGATGGGGCGCAGGCAGCGATTCAATATATAGATTCGCGCAACTTT ACTGAGCCAATGTTTGTGTTTGCGATCATGGTTGTTGCGGGTACTCGCCCGATTTTGCATACCGTGTTGGCTGGGGTGCA TCTGTTGGCGCGGTGGGTGCCGCTGCCAGGCAGGATGGGGTTTTATTTCACCGTGCTGACCTTCATACCGTTGCTTGGGT CGTTCATCACGGAACCGGCAGCGATGACGCTTGCTGCACTGATGCTTTCGCAGGGTGTCTTTGCGAATAAGATTCCGCCC TATCTGAAGTACGCCACGCTCGGGGTACTGTTGGTGAATATTTCTATTGGTGGCACCTTAACAGCGTTCGGGGCACCGCC GGTGTTGATGGTTGCCGCCAAATGGCAATGGGACAACAGTTTTATGCTGCAAACGTTCGGGTGGAAAGCAGTGCTGGCGA TCTTTAGCAACGCTTTGGGGGCAACGTTGTTATTGCGCAACGTATTGCGGCACCTTCCCGAGACACAAGACAATGCTGCA GGTGAGGCGGTGCCGGTTATCTTGCGGGTGATCCATCTTTTGTTGCTCATTGGCATTGTTTGGTTTGCCCATTATCCGGT GGTGTTCATCGGGTTGTTTTTGTTCTTTCTGGGTGTGGCTCACGCGTATCAGGGTTACCAGGATCGTTTGATTCTGCGTG AGGGGCTTTTGGTTGCATTGTTCTTGGCAGGACTGGTGATATTGGGTGGACAGCAACAGTGGTGGTTACAACCGGTGTTG CTCGGCATGACGAGTGATCAAGTGTTTTTCGGTGCGGCAATACTCACGGCGTTTACAGACAATGCAGCGCTGACGTATCT GGGTTCTTTGGTCGCAGGGCTTTCCGATGAGTTCAAGTACGCGTTGGTTGCCGGTGCGGTCACAGGGGGTGGGTTAACGA TTATGGCGAATGCACCCAATCCGGCGGGGATTGCGATTTTGCGCGTGCACTTTAAGGGGGCGTCTGTGCATCCACTGGGA TTGTTGTTGGCTGCTGTGCCGCCCACGGTCATTGCTGCCTTGGCATTCAGATACCTGTGA
Upstream 100 bases:
>100_bases CACGATCGTTTTTTCTTGATGGCTTAGGACTGTTGCCAATGGCGGAATATGCAATTGTTTGGTTCGCTGATGATGTGCTG TGACAATGTAAGGAGTAGTG
Downstream 100 bases:
>100_bases CACGGTGGTTGTTGAGAAGTTCAGGGTACATCTCATCCAGGGGGCGCAGGGGTGTTGCTCTTCTGTCGTTTTGAGAGGGA TGTCTAGGTGGAAGGGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTLTAIQLIGALLFAVAILHTFATKFFERLSHTHPTHAGLWHLLGEVEVVFGFWALVLVVAMCVTDGAQAAIQYIDSRNF TEPMFVFAIMVVAGTRPILHTVLAGVHLLARWVPLPGRMGFYFTVLTFIPLLGSFITEPAAMTLAALMLSQGVFANKIPP YLKYATLGVLLVNISIGGTLTAFGAPPVLMVAAKWQWDNSFMLQTFGWKAVLAIFSNALGATLLLRNVLRHLPETQDNAA GEAVPVILRVIHLLLLIGIVWFAHYPVVFIGLFLFFLGVAHAYQGYQDRLILREGLLVALFLAGLVILGGQQQWWLQPVL LGMTSDQVFFGAAILTAFTDNAALTYLGSLVAGLSDEFKYALVAGAVTGGGLTIMANAPNPAGIAILRVHFKGASVHPLG LLLAAVPPTVIAALAFRYL
Sequences:
>Translated_419_residues MTLTAIQLIGALLFAVAILHTFATKFFERLSHTHPTHAGLWHLLGEVEVVFGFWALVLVVAMCVTDGAQAAIQYIDSRNF TEPMFVFAIMVVAGTRPILHTVLAGVHLLARWVPLPGRMGFYFTVLTFIPLLGSFITEPAAMTLAALMLSQGVFANKIPP YLKYATLGVLLVNISIGGTLTAFGAPPVLMVAAKWQWDNSFMLQTFGWKAVLAIFSNALGATLLLRNVLRHLPETQDNAA GEAVPVILRVIHLLLLIGIVWFAHYPVVFIGLFLFFLGVAHAYQGYQDRLILREGLLVALFLAGLVILGGQQQWWLQPVL LGMTSDQVFFGAAILTAFTDNAALTYLGSLVAGLSDEFKYALVAGAVTGGGLTIMANAPNPAGIAILRVHFKGASVHPLG LLLAAVPPTVIAALAFRYL >Mature_418_residues TLTAIQLIGALLFAVAILHTFATKFFERLSHTHPTHAGLWHLLGEVEVVFGFWALVLVVAMCVTDGAQAAIQYIDSRNFT EPMFVFAIMVVAGTRPILHTVLAGVHLLARWVPLPGRMGFYFTVLTFIPLLGSFITEPAAMTLAALMLSQGVFANKIPPY LKYATLGVLLVNISIGGTLTAFGAPPVLMVAAKWQWDNSFMLQTFGWKAVLAIFSNALGATLLLRNVLRHLPETQDNAAG EAVPVILRVIHLLLLIGIVWFAHYPVVFIGLFLFFLGVAHAYQGYQDRLILREGLLVALFLAGLVILGGQQQWWLQPVLL GMTSDQVFFGAAILTAFTDNAALTYLGSLVAGLSDEFKYALVAGAVTGGGLTIMANAPNPAGIAILRVHFKGASVHPLGL LLAAVPPTVIAALAFRYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45183; Mature: 45052
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTAIQLIGALLFAVAILHTFATKFFERLSHTHPTHAGLWHLLGEVEVVFGFWALVLVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMCVTDGAQAAIQYIDSRNFTEPMFVFAIMVVAGTRPILHTVLAGVHLLARWVPLPGRMG HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCH FYFTVLTFIPLLGSFITEPAAMTLAALMLSQGVFANKIPPYLKYATLGVLLVNISIGGTL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHEEEECCCEE TAFGAPPVLMVAAKWQWDNSFMLQTFGWKAVLAIFSNALGATLLLRNVLRHLPETQDNAA EECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GEAVPVILRVIHLLLLIGIVWFAHYPVVFIGLFLFFLGVAHAYQGYQDRLILREGLLVAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FLAGLVILGGQQQWWLQPVLLGMTSDQVFFGAAILTAFTDNAALTYLGSLVAGLSDEFKY HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH ALVAGAVTGGGLTIMANAPNPAGIAILRVHFKGASVHPLGLLLAAVPPTVIAALAFRYL HHHEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TLTAIQLIGALLFAVAILHTFATKFFERLSHTHPTHAGLWHLLGEVEVVFGFWALVLVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMCVTDGAQAAIQYIDSRNFTEPMFVFAIMVVAGTRPILHTVLAGVHLLARWVPLPGRMG HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCH FYFTVLTFIPLLGSFITEPAAMTLAALMLSQGVFANKIPPYLKYATLGVLLVNISIGGTL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHEEEECCCEE TAFGAPPVLMVAAKWQWDNSFMLQTFGWKAVLAIFSNALGATLLLRNVLRHLPETQDNAA EECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GEAVPVILRVIHLLLLIGIVWFAHYPVVFIGLFLFFLGVAHAYQGYQDRLILREGLLVAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FLAGLVILGGQQQWWLQPVLLGMTSDQVFFGAAILTAFTDNAALTYLGSLVAGLSDEFKY HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH ALVAGAVTGGGLTIMANAPNPAGIAILRVHFKGASVHPLGLLLAAVPPTVIAALAFRYL HHHEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA