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The map label for this gene is ppdD [C]

Identifier: 182680596

GI number: 182680596

Start: 30019

End: 30438

Strand: Direct

Name: ppdD [C]

Synonym: XfasM23_0024

Alternate gene names: 182680596

Gene position: 30019-30438 (Clockwise)

Preceding gene: 182680595

Following gene: 182680598

Centisome position: 1.18

GC content: 49.76

Gene sequence:

>420_bases
ATGTTCGTGAATGATGTAACTTCCATGATTAAAAACAAAAAACAAAACGGCTTCACTTTGATAGAAGTGATGATTGTGGT
GGTGATCGTGGCTATCTTGGCAGCGGTTGCTATGACCAGCTACCAAGGGAGCATTCTCAGAACCCGTCGCTCAGCGGCTC
AAGCCTGCTTACAACAACAAGCACAATTTATAGAGCGTTATTACACAACCCATATGACGTACCTTGGGGTGGAAACATCC
GCGCCAACATGCGATCCCAGCGCCAATCTTGATAACTTTTACCGTTTCACTGTAACTGCGCAGGCAAGCACGTTCATGCT
GACAGCAGATCCCCTGGGAGCACAGGCTGGGGATCACTGTGGCAGGCTCACACTTTCAAACACTGGGGAGCGCACCCCGC
GTGTTGACGGTTGTTGGTGA

Upstream 100 bases:

>100_bases
GAGCGGATGACGGTACGGTTACGTCGTTGAAGACGCCCTCCAGCGGAGGCCTTAATATAAACCGTGTGTCATGGCGTGAA
ATCTTGAGGACTGAGTAACG

Downstream 100 bases:

>100_bases
GGTGATCTGATGTTTGGAGTGCTTGGGCTGTATACATCCAGCATTGAGGAAGCGCGGGAGCGCGCACCGGGGATAACCAA
GAAGCACACGGTGTGCTGGT

Product: PilE protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MFVNDVTSMIKNKKQNGFTLIEVMIVVVIVAILAAVAMTSYQGSILRTRRSAAQACLQQQAQFIERYYTTHMTYLGVETS
APTCDPSANLDNFYRFTVTAQASTFMLTADPLGAQAGDHCGRLTLSNTGERTPRVDGCW

Sequences:

>Translated_139_residues
MFVNDVTSMIKNKKQNGFTLIEVMIVVVIVAILAAVAMTSYQGSILRTRRSAAQACLQQQAQFIERYYTTHMTYLGVETS
APTCDPSANLDNFYRFTVTAQASTFMLTADPLGAQAGDHCGRLTLSNTGERTPRVDGCW
>Mature_139_residues
MFVNDVTSMIKNKKQNGFTLIEVMIVVVIVAILAAVAMTSYQGSILRTRRSAAQACLQQQAQFIERYYTTHMTYLGVETS
APTCDPSANLDNFYRFTVTAQASTFMLTADPLGAQAGDHCGRLTLSNTGERTPRVDGCW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15296; Mature: 15296

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVNDVTSMIKNKKQNGFTLIEVMIVVVIVAILAAVAMTSYQGSILRTRRSAAQACLQQQ
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AQFIERYYTTHMTYLGVETSAPTCDPSANLDNFYRFTVTAQASTFMLTADPLGAQAGDHC
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCC
GRLTLSNTGERTPRVDGCW
CEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MFVNDVTSMIKNKKQNGFTLIEVMIVVVIVAILAAVAMTSYQGSILRTRRSAAQACLQQQ
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AQFIERYYTTHMTYLGVETSAPTCDPSANLDNFYRFTVTAQASTFMLTADPLGAQAGDHC
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCC
GRLTLSNTGERTPRVDGCW
CEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA