Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is aroG [H]
Identifier: 182680589
GI number: 182680589
Start: 21500
End: 22594
Strand: Reverse
Name: aroG [H]
Synonym: XfasM23_0017
Alternate gene names: 182680589
Gene position: 22594-21500 (Counterclockwise)
Preceding gene: 182680597
Following gene: NA
Centisome position: 0.89
GC content: 50.05
Gene sequence:
>1095_bases ATGCCACCATTTACCGACGACCTCCGTATCCGAAAAATTGAACCACTGACACCTCCTAACAAGCTCCTCTTACAACTACC ATGCGATGAGCAGGCATCGCTGACTGTTGCGACCTCACGCAACGCACTGCACGATATCCTGCACGGCCACAATGACCGTT TAGCCGTCGTGATAGGCCCATGCTCAATCCATGATCCAATTGCAGCCATTGATTACTCGCAACGTCTACGCCCATTGCGT GAGATGTACAAGGATGCACTAGAAATCGTGATGCGAGTTTACTTTCAGAAACCGCGCACCACTATTGGTTGGAAAGGATT GGTCAACGATCCGGATCTTGATGGCAGCTTCCAGATCAATAAGGGCTTGCATATCGCGCGCAACCTGCTGCGCGATATCA ATCATCTCGGCTTACCCGCTGGTGTGGAATTTCTAGACACGATTTCGCCGCAATATCTGGCTGACTTAGTCGCCTGGGGT GCCATTGGTGCTCGCACCACTGAAAGCCAAATACACCGTGAAATGGCTTCAGGTTTATCGTGCCCGATTGGCTTTAAAAA CAGTACCAGTGGTGATGTGAAGATTGCTGCTGACGCGATTAAAGCAGCTTCGCATCCGCACCATTTCCTTTCAGTGACAA AGACAGGTGTTGCCGCAGTCGTCGCCACCCAGGGTAACCCCGATTGTCACGTGATTCTGCGTGGAGGCAAGGTCCCGAAT TACGACGCAATCAATGTCGAAGCTGCCAGCCAAACATTGCTTAAATCCAAGCTACCGGTGCGACTGATGATTGATGCGAG CCATGCCAATAGCGGCAAAAATCCAAACAATCAACCTAAGGTGATCGAGAACATCGTAGAACAGCTTAAAGCCGGTGAAC GCCGCATCATCGGTGTCATGATTGAAAGCCACATTGTTGGTGGCCGGCAAGAATTAGTCCTTGGAAACACACTTAACTAT GGACAGAGCATTACCGATGCTTGCATCGACTGGGATACCTCGGTTGCAATGTTAGAACAGCTCGCTCAGGCCGTACGCGT CAGACAGACTCTACCAACGACCACTACAGCTAACAAAACATCAAAAACCCAATAA
Upstream 100 bases:
>100_bases GAAACTTCACCCGCATCCTCGAAAGCCGCCAATGTGTTTGGCGGCTTTTTTATTGTCTCCTCCGCTTGGTCTATGTCTAA ATGTTCTGAGATTACATCCC
Downstream 100 bases:
>100_bases CAGCGCGTATCACGCGCATTTTTTCCAGCTTTCTTAAACTAACTTCTCTGTCATCGACACCTAAAAATCAAACATTTATA TGTCCCAGCATCCAGCCACA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPPFTDDLRIRKIEPLTPPNKLLLQLPCDEQASLTVATSRNALHDILHGHNDRLAVVIGPCSIHDPIAAIDYSQRLRPLR EMYKDALEIVMRVYFQKPRTTIGWKGLVNDPDLDGSFQINKGLHIARNLLRDINHLGLPAGVEFLDTISPQYLADLVAWG AIGARTTESQIHREMASGLSCPIGFKNSTSGDVKIAADAIKAASHPHHFLSVTKTGVAAVVATQGNPDCHVILRGGKVPN YDAINVEAASQTLLKSKLPVRLMIDASHANSGKNPNNQPKVIENIVEQLKAGERRIIGVMIESHIVGGRQELVLGNTLNY GQSITDACIDWDTSVAMLEQLAQAVRVRQTLPTTTTANKTSKTQ
Sequences:
>Translated_364_residues MPPFTDDLRIRKIEPLTPPNKLLLQLPCDEQASLTVATSRNALHDILHGHNDRLAVVIGPCSIHDPIAAIDYSQRLRPLR EMYKDALEIVMRVYFQKPRTTIGWKGLVNDPDLDGSFQINKGLHIARNLLRDINHLGLPAGVEFLDTISPQYLADLVAWG AIGARTTESQIHREMASGLSCPIGFKNSTSGDVKIAADAIKAASHPHHFLSVTKTGVAAVVATQGNPDCHVILRGGKVPN YDAINVEAASQTLLKSKLPVRLMIDASHANSGKNPNNQPKVIENIVEQLKAGERRIIGVMIESHIVGGRQELVLGNTLNY GQSITDACIDWDTSVAMLEQLAQAVRVRQTLPTTTTANKTSKTQ >Mature_363_residues PPFTDDLRIRKIEPLTPPNKLLLQLPCDEQASLTVATSRNALHDILHGHNDRLAVVIGPCSIHDPIAAIDYSQRLRPLRE MYKDALEIVMRVYFQKPRTTIGWKGLVNDPDLDGSFQINKGLHIARNLLRDINHLGLPAGVEFLDTISPQYLADLVAWGA IGARTTESQIHREMASGLSCPIGFKNSTSGDVKIAADAIKAASHPHHFLSVTKTGVAAVVATQGNPDCHVILRGGKVPNY DAINVEAASQTLLKSKLPVRLMIDASHANSGKNPNNQPKVIENIVEQLKAGERRIIGVMIESHIVGGRQELVLGNTLNYG QSITDACIDWDTSVAMLEQLAQAVRVRQTLPTTTTANKTSKTQ
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=344, Percent_Identity=62.2093023255814, Blast_Score=442, Evalue=1e-125, Organism=Escherichia coli, GI1787996, Length=344, Percent_Identity=51.1627906976744, Blast_Score=370, Evalue=1e-104, Organism=Escherichia coli, GI1788953, Length=339, Percent_Identity=49.2625368731563, Blast_Score=346, Evalue=1e-96, Organism=Saccharomyces cerevisiae, GI6319726, Length=352, Percent_Identity=52.8409090909091, Blast_Score=358, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6320240, Length=352, Percent_Identity=51.4204545454545, Blast_Score=357, Evalue=1e-99,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39729; Mature: 39598
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPFTDDLRIRKIEPLTPPNKLLLQLPCDEQASLTVATSRNALHDILHGHNDRLAVVIGP CCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEECHHHHHHHHCCCCCEEEEEEEC CSIHDPIAAIDYSQRLRPLREMYKDALEIVMRVYFQKPRTTIGWKGLVNDPDLDGSFQIN CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLHIARNLLRDINHLGLPAGVEFLDTISPQYLADLVAWGAIGARTTESQIHREMASGLS CCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC CPIGFKNSTSGDVKIAADAIKAASHPHHFLSVTKTGVAAVVATQGNPDCHVILRGGKVPN CCCCCCCCCCCCEEEEHHHHHHCCCCHHHHEECCCCEEEEEEECCCCCEEEEEECCCCCC YDAINVEAASQTLLKSKLPVRLMIDASHANSGKNPNNQPKVIENIVEQLKAGERRIIGVM CCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE IESHIVGGRQELVLGNTLNYGQSITDACIDWDTSVAMLEQLAQAVRVRQTLPTTTTANKT EHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC SKTQ CCCC >Mature Secondary Structure PPFTDDLRIRKIEPLTPPNKLLLQLPCDEQASLTVATSRNALHDILHGHNDRLAVVIGP CCCCCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEECHHHHHHHHCCCCCEEEEEEEC CSIHDPIAAIDYSQRLRPLREMYKDALEIVMRVYFQKPRTTIGWKGLVNDPDLDGSFQIN CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLHIARNLLRDINHLGLPAGVEFLDTISPQYLADLVAWGAIGARTTESQIHREMASGLS CCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC CPIGFKNSTSGDVKIAADAIKAASHPHHFLSVTKTGVAAVVATQGNPDCHVILRGGKVPN CCCCCCCCCCCCEEEEHHHHHHCCCCHHHHEECCCCEEEEEEECCCCCEEEEEECCCCCC YDAINVEAASQTLLKSKLPVRLMIDASHANSGKNPNNQPKVIENIVEQLKAGERRIIGVM CCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE IESHIVGGRQELVLGNTLNYGQSITDACIDWDTSVAMLEQLAQAVRVRQTLPTTTTANKT EHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC SKTQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]