Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677504
Identifier: 182677504
GI number: 182677504
Start: 563661
End: 564203
Strand: Direct
Name: 182677504
Synonym: Bind_0508
Alternate gene names: NA
Gene position: 563661-564203 (Clockwise)
Preceding gene: 182677503
Following gene: 182677506
Centisome position: 13.52
GC content: 57.46
Gene sequence:
>543_bases ATGACCGGGGCTGGAGAAAAGGAGAGGGGGCTGTACAAGATTCTCGTCGTCGGTCTCGGCAATCCAGACAGGGGCGACGA TGGCATTGGCGCGGCCGTCATCCAAAGTCTCACAGGCCGGCTGCCGCCTGATGTCGCGCTTCTAATGAAGCGCGGCGATA TCCTCTCTCTTATCGAAGAATGGTCTGGAATCAATGCCTTGATCTGTGTGGATGCCTCCGCGCCGATGGGAACCCCCGGC CGTATTCATCGGATCGACGCCGCGGCTGGCATATCGCCAAGTGATGTTTCCTTCACGTCGAGTCATGCATTTGGTCTCGC TGAGGTGATCGCGCTTGGCCAAACGCTTCAGCTGCTCCCAGAGGTCGCCATTGTATATGCCATCGAAGGGGCTACCTTCG ACAATGGCGCACCGATGACACCCATTGTCGCTGCGGCTGCCAGGGACGTTGCGAACCGCATCGTCGTCGAGGTTGAGCGG CTGCGGCAAAATCCTATCAGCATCGTGTCGGGTGATCCTAATATAAAGGGAAGTCGAAAATAG
Upstream 100 bases:
>100_bases CTGACGATGTCATCCGTGCTCGTTGCGAGCAGGCGATCCGCAACTATGATCCCTGCATTTCGTGCTCTGCTCATTTCCTC AAGCTCTCGGTGCGGCGGAC
Downstream 100 bases:
>100_bases TCGATCCGCCCTCATATTCCACCACTGCACGGATCGACTTGCCATGCATCAAGTCGAACCCTTTACAATCGAACGTGTAG TCGGCGCCGCCTTTGGTCAG
Product: hydrogenase maturation protease
Products: NA
Alternate protein names: Peptidase; Peptidase M; Hydrogenase Maturation Protease Superfamily; Soluble Hydrogenase Processing Peptidase HoxW
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTGAGEKERGLYKILVVGLGNPDRGDDGIGAAVIQSLTGRLPPDVALLMKRGDILSLIEEWSGINALICVDASAPMGTPG RIHRIDAAAGISPSDVSFTSSHAFGLAEVIALGQTLQLLPEVAIVYAIEGATFDNGAPMTPIVAAAARDVANRIVVEVER LRQNPISIVSGDPNIKGSRK
Sequences:
>Translated_180_residues MTGAGEKERGLYKILVVGLGNPDRGDDGIGAAVIQSLTGRLPPDVALLMKRGDILSLIEEWSGINALICVDASAPMGTPG RIHRIDAAAGISPSDVSFTSSHAFGLAEVIALGQTLQLLPEVAIVYAIEGATFDNGAPMTPIVAAAARDVANRIVVEVER LRQNPISIVSGDPNIKGSRK >Mature_179_residues TGAGEKERGLYKILVVGLGNPDRGDDGIGAAVIQSLTGRLPPDVALLMKRGDILSLIEEWSGINALICVDASAPMGTPGR IHRIDAAAGISPSDVSFTSSHAFGLAEVIALGQTLQLLPEVAIVYAIEGATFDNGAPMTPIVAAAARDVANRIVVEVERL RQNPISIVSGDPNIKGSRK
Specific function: Unknown
COG id: COG0680
COG function: function code C; Ni,Fe-hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18719; Mature: 18588
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAGEKERGLYKILVVGLGNPDRGDDGIGAAVIQSLTGRLPPDVALLMKRGDILSLIEE CCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHH WSGINALICVDASAPMGTPGRIHRIDAAAGISPSDVSFTSSHAFGLAEVIALGQTLQLLP HCCCCEEEEEECCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EVAIVYAIEGATFDNGAPMTPIVAAAARDVANRIVVEVERLRQNPISIVSGDPNIKGSRK HEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure TGAGEKERGLYKILVVGLGNPDRGDDGIGAAVIQSLTGRLPPDVALLMKRGDILSLIEE CCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHH WSGINALICVDASAPMGTPGRIHRIDAAAGISPSDVSFTSSHAFGLAEVIALGQTLQLLP HCCCCEEEEEECCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EVAIVYAIEGATFDNGAPMTPIVAAAARDVANRIVVEVERLRQNPISIVSGDPNIKGSRK HEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA