Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677391
Identifier: 182677391
GI number: 182677391
Start: 455603
End: 456409
Strand: Direct
Name: 182677391
Synonym: Bind_0395
Alternate gene names: NA
Gene position: 455603-456409 (Clockwise)
Preceding gene: 182677390
Following gene: 182677392
Centisome position: 10.93
GC content: 57.5
Gene sequence:
>807_bases GTGGACGCGGAAAACGATCCAGCGCTCGATTGGCTCGGCCTGCCGGTCGATTGTCACACTTGTCCGCATCGCGCTTTTCT CGAAGACGGTCAGTGCCGGCCGGCTCATACCTGCATCCTGGACCGACGCATCAAACATATGGATCGGTTCCTGCGCAAAC ATCAGTCCATGGCTGACGGTTTTCTCGATCATCCCTATTTCGAATTGCGCGCGGTTGCGGCCAAACATGCCTCACTGTTT CGCATCGCGCCGATGGTTAATGATCTTGAGCCCGAAGTGCGTATGACCGTGGTCGCGCGCTTACCTTATGAGCGTGTCAA ACATCTTGCCAATGATCCTGATCGGCGCGTGCGCATTGGCGTCGCGTTGAAAATGGAAGGGCAAGCGTTGATCGCGCGGC TCGGTGACTCCGATTATCATGTGCGGGTCGTCATCGTTCGCAAATTGTCTCCCGATCTTTTGCCGATTGCCATGCACGAC CCGGAGCCGACGGTCAGGCGTTGGGTGGCGCGGCGTATTGTGGAAAATCGCCTGATCGACATGCGTCATGACAAGCATCC CATGGTCCGGCTCGATGTCGCCGAGCGCATGGCGCCCGAAAGTTTGTCGTTGTTCGTCGATGATCCCGATCTGCGCGTTC GCTTCGTTGCCGCGGAGCGGATTGGTCTCGATCAGGTCGCGCTCTTTAAAGATGACAGTGAATCGATCATCCGCGATCTT GTCGCCCAACGCCTGCGCGAAGGCGAACAATCCACTGCTCTCAAAATCGTCCTCTCGCCGGGTGATCCTCTTTCGCCCCT TGCCTGA
Upstream 100 bases:
>100_bases GCGTTCCCGCGTAAGTTCGCCTGATCCGACCTTATGCCTGTGTGATTTTGACGCCGGCCTGCCCCAAGCAGCGCCGGCGT TTTTATGTCGGGAGAATGTC
Downstream 100 bases:
>100_bases TGCTTCTTTGACAGTCGTTTCGTTTGTCCGGGGCTTTGTCGGAAAGCGGCCGACACATGTCCTTCTTTTGTGCATCGGAA GCTTTTGTCGCTTATCGTTC
Product: LRV FeS4 cluster domain-containing protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDAENDPALDWLGLPVDCHTCPHRAFLEDGQCRPAHTCILDRRIKHMDRFLRKHQSMADGFLDHPYFELRAVAAKHASLF RIAPMVNDLEPEVRMTVVARLPYERVKHLANDPDRRVRIGVALKMEGQALIARLGDSDYHVRVVIVRKLSPDLLPIAMHD PEPTVRRWVARRIVENRLIDMRHDKHPMVRLDVAERMAPESLSLFVDDPDLRVRFVAAERIGLDQVALFKDDSESIIRDL VAQRLREGEQSTALKIVLSPGDPLSPLA
Sequences:
>Translated_268_residues MDAENDPALDWLGLPVDCHTCPHRAFLEDGQCRPAHTCILDRRIKHMDRFLRKHQSMADGFLDHPYFELRAVAAKHASLF RIAPMVNDLEPEVRMTVVARLPYERVKHLANDPDRRVRIGVALKMEGQALIARLGDSDYHVRVVIVRKLSPDLLPIAMHD PEPTVRRWVARRIVENRLIDMRHDKHPMVRLDVAERMAPESLSLFVDDPDLRVRFVAAERIGLDQVALFKDDSESIIRDL VAQRLREGEQSTALKIVLSPGDPLSPLA >Mature_268_residues MDAENDPALDWLGLPVDCHTCPHRAFLEDGQCRPAHTCILDRRIKHMDRFLRKHQSMADGFLDHPYFELRAVAAKHASLF RIAPMVNDLEPEVRMTVVARLPYERVKHLANDPDRRVRIGVALKMEGQALIARLGDSDYHVRVVIVRKLSPDLLPIAMHD PEPTVRRWVARRIVENRLIDMRHDKHPMVRLDVAERMAPESLSLFVDDPDLRVRFVAAERIGLDQVALFKDDSESIIRDL VAQRLREGEQSTALKIVLSPGDPLSPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004830 - InterPro: IPR008665 [H]
Pfam domain/function: PF01816 LRV; PF05484 LRV_FeS [H]
EC number: NA
Molecular weight: Translated: 30650; Mature: 30650
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAENDPALDWLGLPVDCHTCPHRAFLEDGQCRPAHTCILDRRIKHMDRFLRKHQSMADG CCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLDHPYFELRAVAAKHASLFRIAPMVNDLEPEVRMTVVARLPYERVKHLANDPDRRVRIG HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHCCHHHHHHHHCCCCCEEEEE VALKMEGQALIARLGDSDYHVRVVIVRKLSPDLLPIAMHDPEPTVRRWVARRIVENRLID EEEEECCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH MRHDKHPMVRLDVAERMAPESLSLFVDDPDLRVRFVAAERIGLDQVALFKDDSESIIRDL CCCCCCCEEEEEHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCHHHHHHHH VAQRLREGEQSTALKIVLSPGDPLSPLA HHHHHHCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MDAENDPALDWLGLPVDCHTCPHRAFLEDGQCRPAHTCILDRRIKHMDRFLRKHQSMADG CCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLDHPYFELRAVAAKHASLFRIAPMVNDLEPEVRMTVVARLPYERVKHLANDPDRRVRIG HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHCCHHHHHHHHCCCCCEEEEE VALKMEGQALIARLGDSDYHVRVVIVRKLSPDLLPIAMHDPEPTVRRWVARRIVENRLID EEEEECCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH MRHDKHPMVRLDVAERMAPESLSLFVDDPDLRVRFVAAERIGLDQVALFKDDSESIIRDL CCCCCCCEEEEEHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCHHHHHHHH VAQRLREGEQSTALKIVLSPGDPLSPLA HHHHHHCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2836706 [H]