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The map label for this gene is yccM [C]

Identifier: 182677388

GI number: 182677388

Start: 451025

End: 452479

Strand: Direct

Name: yccM [C]

Synonym: Bind_0392

Alternate gene names: 182677388

Gene position: 451025-452479 (Clockwise)

Preceding gene: 182677387

Following gene: 182677389

Centisome position: 10.82

GC content: 60.96

Gene sequence:

>1455_bases
ATGGCGGCGTCTTTGAGTTCAGTTGGATCGGGTGAGCGGCGGGATGAGTCCACCCTCTCGCCCAGCATGCCTCCCCTGGT
CCGGCAAAGCTTCGCGCATGGTCTTGGCGAATGGCTGCGGCGCCACCAGCGGATGATTCAAACCACGCAATGGGGTGTGG
TTCTTGTCTATCTCGTCCTCGTTGCCGTCCCGGCCTTTTTGCCTTTGCCGGATCGCACCGCTCATGTCTGGAACAATCTG
ACCGTCTTCGCTCAATTCGCTTTCTGGGGTCTGTGGTGGCCCTTCGTTCTCCTCAGCATGGTGCTTGTCGGGCGCACCTG
GTGCGGCGTCTTTTGTCCCGAGGGCGCCCTGACGGAAGCTGTGAGCCGGGTCGGTCTCGGCCTTTCCGTGCCGCGCTGGA
TCAAATGGAAAGGCTGGCCATTCGTCGCCTTCGTTTGCACCACTGTCTATGGCCAGATGCTCAGCATCTACCAATATCCC
ATGCCCGTATTGCTCATTCTCGGAGGCTCGACGGCTGGAGCCATGGCGGTTGGCGCTCTTTACGGCCGCAATAAACGGGT
TTGGTGCCGCTATCTCTGTCCCGTCAATGGTGTGTTCGGCCTCCTCGCCAAACTGGCTCCGGTCCATTTCAAGGTCGATC
AGGATGCCTGGGCGGACTCGCAGAAAAATGGCGATGCCGGCATTCGGGCTTTGAATTGCGCTCCCCTTGTCCCGATCCGC
ACCATGCGGGGCGCTGCCGATTGTCATATGTGTGGCCGCTGCAGTGATTTTCGTGGCGCCGTTTCCTACAGTCTGCGTTC
GCCGGCGGAGGAAATTGTCGATGTCGCGGGCCAGACCGCCAAACCTTGGGAGACGATGCTGATCGTCTTCGGCCTGATGG
GGGTCGCTGTTGGCGCCTTCCACTGGACCGCGAGCCCCTGGTATGTCGACATGAAGGAAGCCGTGGCGACCTGGCTGATC
GATCATTCGATCCTCTGGCCGTTGCAGATCGAGCCTCCGTGGTGGATTCTCACGCATTATCCCGATCTCAACGACAGCAT
GACCCTGCTCGATGGGGCGGTGCTGCTCTTTTATATATTCGCCACCGCCTTGGTGCTCGGCGGTGCGATTTCACTCTGCC
TCGCGGTCGGAACGCTCTGTCTTGGGGGCTGGTCCTCGGCGCGCTTCCATCATCTTGCCCAAAGCCTGGTCCCCATGGCA
GGTTGCGGTGTTTTTCTCGGTCTCAGCGCCACGACCGTGACTTTGCTCAAGGCCGAGGGCATCACCATTGCCTCTCTCTC
GCTGTTGCGAGGCGGTCTGTTGCTTGGGGCCTTCCTTTGGGTTGTCTGGCTGGCCTTTGCGATCAGCGGCCGTGAAACGG
GCCACATAATTCGCCGCATGGGCGCGACCCTCGCGCTGGCCGGCGCGGCGGGCGTCGGTGTCGCGAGCTGGGTCGTGATG
TTCTGGATCTGGTAA

Upstream 100 bases:

>100_bases
AGACTTACGGCATCGTCCCGGTTTTGTGAGCGATGCTGTCACCAAGAAGAGACCTTGGTCGAACCAGACATCCGATCAAG
CAGACTTGAATGGGACCATC

Downstream 100 bases:

>100_bases
TAACGAGATCATGTCAAATGTCCGGCGCCTCAAAGTTCCCGATGCGTGAGAGTCCCTGATGCGTGTCCTGGCACCAGACA
ACCGGGATCTTTGAAGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein; Polyferredoxin-Like Protein; Nitrogen Assimilation Regulatory Protein; Polyferredoxin; Sigma-54 Interaction Domain Family; Polyferredoxin-Like; Nitrogen Regulatory Protein; Ferredoxin; Polyferredoxin Protein

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MAASLSSVGSGERRDESTLSPSMPPLVRQSFAHGLGEWLRRHQRMIQTTQWGVVLVYLVLVAVPAFLPLPDRTAHVWNNL
TVFAQFAFWGLWWPFVLLSMVLVGRTWCGVFCPEGALTEAVSRVGLGLSVPRWIKWKGWPFVAFVCTTVYGQMLSIYQYP
MPVLLILGGSTAGAMAVGALYGRNKRVWCRYLCPVNGVFGLLAKLAPVHFKVDQDAWADSQKNGDAGIRALNCAPLVPIR
TMRGAADCHMCGRCSDFRGAVSYSLRSPAEEIVDVAGQTAKPWETMLIVFGLMGVAVGAFHWTASPWYVDMKEAVATWLI
DHSILWPLQIEPPWWILTHYPDLNDSMTLLDGAVLLFYIFATALVLGGAISLCLAVGTLCLGGWSSARFHHLAQSLVPMA
GCGVFLGLSATTVTLLKAEGITIASLSLLRGGLLLGAFLWVVWLAFAISGRETGHIIRRMGATLALAGAAGVGVASWVVM
FWIW

Sequences:

>Translated_484_residues
MAASLSSVGSGERRDESTLSPSMPPLVRQSFAHGLGEWLRRHQRMIQTTQWGVVLVYLVLVAVPAFLPLPDRTAHVWNNL
TVFAQFAFWGLWWPFVLLSMVLVGRTWCGVFCPEGALTEAVSRVGLGLSVPRWIKWKGWPFVAFVCTTVYGQMLSIYQYP
MPVLLILGGSTAGAMAVGALYGRNKRVWCRYLCPVNGVFGLLAKLAPVHFKVDQDAWADSQKNGDAGIRALNCAPLVPIR
TMRGAADCHMCGRCSDFRGAVSYSLRSPAEEIVDVAGQTAKPWETMLIVFGLMGVAVGAFHWTASPWYVDMKEAVATWLI
DHSILWPLQIEPPWWILTHYPDLNDSMTLLDGAVLLFYIFATALVLGGAISLCLAVGTLCLGGWSSARFHHLAQSLVPMA
GCGVFLGLSATTVTLLKAEGITIASLSLLRGGLLLGAFLWVVWLAFAISGRETGHIIRRMGATLALAGAAGVGVASWVVM
FWIW
>Mature_483_residues
AASLSSVGSGERRDESTLSPSMPPLVRQSFAHGLGEWLRRHQRMIQTTQWGVVLVYLVLVAVPAFLPLPDRTAHVWNNLT
VFAQFAFWGLWWPFVLLSMVLVGRTWCGVFCPEGALTEAVSRVGLGLSVPRWIKWKGWPFVAFVCTTVYGQMLSIYQYPM
PVLLILGGSTAGAMAVGALYGRNKRVWCRYLCPVNGVFGLLAKLAPVHFKVDQDAWADSQKNGDAGIRALNCAPLVPIRT
MRGAADCHMCGRCSDFRGAVSYSLRSPAEEIVDVAGQTAKPWETMLIVFGLMGVAVGAFHWTASPWYVDMKEAVATWLID
HSILWPLQIEPPWWILTHYPDLNDSMTLLDGAVLLFYIFATALVLGGAISLCLAVGTLCLGGWSSARFHHLAQSLVPMAG
CGVFLGLSATTVTLLKAEGITIASLSLLRGGLLLGAFLWVVWLAFAISGRETGHIIRRMGATLALAGAAGVGVASWVVMF
WIW

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787226, Length=254, Percent_Identity=23.6220472440945, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52768; Mature: 52636

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASLSSVGSGERRDESTLSPSMPPLVRQSFAHGLGEWLRRHQRMIQTTQWGVVLVYLVL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVPAFLPLPDRTAHVWNNLTVFAQFAFWGLWWPFVLLSMVLVGRTWCGVFCPEGALTEA
HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VSRVGLGLSVPRWIKWKGWPFVAFVCTTVYGQMLSIYQYPMPVLLILGGSTAGAMAVGAL
HHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
YGRNKRVWCRYLCPVNGVFGLLAKLAPVHFKVDQDAWADSQKNGDAGIRALNCAPLVPIR
HCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCHH
TMRGAADCHMCGRCSDFRGAVSYSLRSPAEEIVDVAGQTAKPWETMLIVFGLMGVAVGAF
HHCCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HWTASPWYVDMKEAVATWLIDHSILWPLQIEPPWWILTHYPDLNDSMTLLDGAVLLFYIF
EECCCCCEEEHHHHHHHHHHHCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ATALVLGGAISLCLAVGTLCLGGWSSARFHHLAQSLVPMAGCGVFLGLSATTVTLLKAEG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHEEEEEEECC
ITIASLSLLRGGLLLGAFLWVVWLAFAISGRETGHIIRRMGATLALAGAAGVGVASWVVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEECCCCCCHHHHHHHH
FWIW
HHCC
>Mature Secondary Structure 
AASLSSVGSGERRDESTLSPSMPPLVRQSFAHGLGEWLRRHQRMIQTTQWGVVLVYLVL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVPAFLPLPDRTAHVWNNLTVFAQFAFWGLWWPFVLLSMVLVGRTWCGVFCPEGALTEA
HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VSRVGLGLSVPRWIKWKGWPFVAFVCTTVYGQMLSIYQYPMPVLLILGGSTAGAMAVGAL
HHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
YGRNKRVWCRYLCPVNGVFGLLAKLAPVHFKVDQDAWADSQKNGDAGIRALNCAPLVPIR
HCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCHH
TMRGAADCHMCGRCSDFRGAVSYSLRSPAEEIVDVAGQTAKPWETMLIVFGLMGVAVGAF
HHCCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HWTASPWYVDMKEAVATWLIDHSILWPLQIEPPWWILTHYPDLNDSMTLLDGAVLLFYIF
EECCCCCEEEHHHHHHHHHHHCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ATALVLGGAISLCLAVGTLCLGGWSSARFHHLAQSLVPMAGCGVFLGLSATTVTLLKAEG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHEEEEEEECC
ITIASLSLLRGGLLLGAFLWVVWLAFAISGRETGHIIRRMGATLALAGAAGVGVASWVVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEECCCCCCHHHHHHHH
FWIW
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA