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The map label for this gene is 182677377

Identifier: 182677377

GI number: 182677377

Start: 440059

End: 440922

Strand: Direct

Name: 182677377

Synonym: Bind_0381

Alternate gene names: NA

Gene position: 440059-440922 (Clockwise)

Preceding gene: 182677376

Following gene: 182677378

Centisome position: 10.55

GC content: 54.86

Gene sequence:

>864_bases
TTGACACCGAGAGCGAACTGGAAAGGCCTTCTCAAGATCGCCGAGGTCACCTGCCAGGTCGCCCTCTATACCGCGGTTTC
GACATCCGAGCGTATCGCTTTCCACACTCTTAATCGGGCGACCGGCCATCGTGTCCAACGTCGTTTCATCGATAGCGAGA
CCGGTAGCCCTGTCGAGAAAGCCGATCAAGTCAAAGGTTATGAAACCGGCTCTCGAGACTATGTGATTTTAGAACCTGAG
GAGATTGCTGAAGCGATACCGGAAACCGACAAGATCTTGTCGGTTTCCGCATTCATCCGCTGCGATGATATTGACGACAT
CTATTTTGACAAACCCTATTATCTTGCTCCAGCCGATCCCCATAGCGAGGAAAGCTATGCGGTGATCCATGAAGGCTTGC
GGACAAAGAACGTTGCCGCACTCGCGCAGACGGTTCTTTTTCGCCGCTTGCGCACGGTCCTGATCCGCGTGCAGGGGCGT
GGGATGATCGCGACCACTCTCAATTTCGACTATGAGGTTCTTCCCGCCGGCAAGGCTTTCGAAGACATCCCCACGCTGAA
GGTTGAAGGCGAGATGGTGGAACTGGCGGAGCATATTATCCAGAAGAAAATAGGCCATTTCAATCCAGCGGAATTTGACG
ATCGCTACGAGGCGGGCCTCGCTGAACTCGTGAAGGCAAAGCTCGAAGGAAAGGAGATTCAGGCGCCGAGGAAGCCACAA
CGCGGGAAAGTCATCGATCTCATGACGGCCTTGCGGGACAGTGCGGCCTTGGTGGCGAAAAAAGCCGCCTCATCGTCTTC
TGGCAAGTCGAAAGCGACGGCCCCAAAGGAAAAGGCCACGCCTCGTCGACGCAAGGCGAGTTAA

Upstream 100 bases:

>100_bases
ATTGACTCCCAGGGTGGAGGCGGCTCACCCTGACCTCGACCGATCGCGCTTTTGGATACACGCCTCCCCAGCGGCTTCAT
CAATAGCCGGGAGTTTGGCC

Downstream 100 bases:

>100_bases
GGGCATGGCCGCTCTCGACACCCATCACCAGAAACGCGCGAAAGCATCACCCTTTTTAGATTCTCTCGCCATCCAGGGAG
CAAAAAAGGCCTCGCTGCCC

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTPRANWKGLLKIAEVTCQVALYTAVSTSERIAFHTLNRATGHRVQRRFIDSETGSPVEKADQVKGYETGSRDYVILEPE
EIAEAIPETDKILSVSAFIRCDDIDDIYFDKPYYLAPADPHSEESYAVIHEGLRTKNVAALAQTVLFRRLRTVLIRVQGR
GMIATTLNFDYEVLPAGKAFEDIPTLKVEGEMVELAEHIIQKKIGHFNPAEFDDRYEAGLAELVKAKLEGKEIQAPRKPQ
RGKVIDLMTALRDSAALVAKKAASSSSGKSKATAPKEKATPRRRKAS

Sequences:

>Translated_287_residues
MTPRANWKGLLKIAEVTCQVALYTAVSTSERIAFHTLNRATGHRVQRRFIDSETGSPVEKADQVKGYETGSRDYVILEPE
EIAEAIPETDKILSVSAFIRCDDIDDIYFDKPYYLAPADPHSEESYAVIHEGLRTKNVAALAQTVLFRRLRTVLIRVQGR
GMIATTLNFDYEVLPAGKAFEDIPTLKVEGEMVELAEHIIQKKIGHFNPAEFDDRYEAGLAELVKAKLEGKEIQAPRKPQ
RGKVIDLMTALRDSAALVAKKAASSSSGKSKATAPKEKATPRRRKAS
>Mature_286_residues
TPRANWKGLLKIAEVTCQVALYTAVSTSERIAFHTLNRATGHRVQRRFIDSETGSPVEKADQVKGYETGSRDYVILEPEE
IAEAIPETDKILSVSAFIRCDDIDDIYFDKPYYLAPADPHSEESYAVIHEGLRTKNVAALAQTVLFRRLRTVLIRVQGRG
MIATTLNFDYEVLPAGKAFEDIPTLKVEGEMVELAEHIIQKKIGHFNPAEFDDRYEAGLAELVKAKLEGKEIQAPRKPQR
GKVIDLMTALRDSAALVAKKAASSSSGKSKATAPKEKATPRRRKAS

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31884; Mature: 31753

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRANWKGLLKIAEVTCQVALYTAVSTSERIAFHTLNRATGHRVQRRFIDSETGSPVEK
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCHHH
ADQVKGYETGSRDYVILEPEEIAEAIPETDKILSVSAFIRCDDIDDIYFDKPYYLAPADP
HHHCCCCCCCCCCEEEECHHHHHHHCCCCHHEEEEEEEEEECCCCCCCCCCCEEECCCCC
HSEESYAVIHEGLRTKNVAALAQTVLFRRLRTVLIRVQGRGMIATTLNFDYEVLPAGKAF
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCEEEECCCCCH
EDIPTLKVEGEMVELAEHIIQKKIGHFNPAEFDDRYEAGLAELVKAKLEGKEIQAPRKPQ
HHCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
RGKVIDLMTALRDSAALVAKKAASSSSGKSKATAPKEKATPRRRKAS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
TPRANWKGLLKIAEVTCQVALYTAVSTSERIAFHTLNRATGHRVQRRFIDSETGSPVEK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCHHH
ADQVKGYETGSRDYVILEPEEIAEAIPETDKILSVSAFIRCDDIDDIYFDKPYYLAPADP
HHHCCCCCCCCCCEEEECHHHHHHHCCCCHHEEEEEEEEEECCCCCCCCCCCEEECCCCC
HSEESYAVIHEGLRTKNVAALAQTVLFRRLRTVLIRVQGRGMIATTLNFDYEVLPAGKAF
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCEEEECCCCCH
EDIPTLKVEGEMVELAEHIIQKKIGHFNPAEFDDRYEAGLAELVKAKLEGKEIQAPRKPQ
HHCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
RGKVIDLMTALRDSAALVAKKAASSSSGKSKATAPKEKATPRRRKAS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA