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The map label for this gene is bfrD [H]

Identifier: 182677237

GI number: 182677237

Start: 276861

End: 279194

Strand: Direct

Name: bfrD [H]

Synonym: Bind_0238

Alternate gene names: 182677237

Gene position: 276861-279194 (Clockwise)

Preceding gene: 182677231

Following gene: 182677243

Centisome position: 6.64

GC content: 54.03

Gene sequence:

>2334_bases
ATGAAACGGGACGAGTTCGAGATTTTTGAGGGAAGCGCGGCAAATACTCCGGCGACAGAACTTTACATCAAGGCCAAGGC
GCGTCCGCCGCTCAAGAACGCGGTTGTCGGGCTTGCCTCGCTCATGCTCGGCGGTGGCGCCGCGACCGCCCAGGAGAGCA
CGAATCTCGCGCTTGAACAGATCGAGGTTGAAGCCGGCAATGCCAGCAACAACGGCAGCGCCTACAATCCCCGCTCCACG
GGGCTCGACCGTCTGCCGGAGCCGATCCTCGATACGGCGCAGAGCATCAATGTCATTCCGCAGCAATTGCTGCGCGATCA
GCAGACGACAACCATGGTCGAGGCCTTGCGCAATGTGCCGGGCATTTCGATCAATAGCGCGGAGGGCGGCACGCAGGGCG
ACAATATCAACATTCGCGGATTTTCGGCGCGCAATGACATCTATCGTGATGGTATCCGTGAGCCTGCCTGGTATTCGCGC
GATTCCTTCAGCGTCGAAAATATCGATGTGTATAAAGGTCCGTCCTCGTTCATCTTCGGTCGCGGCTCGACGGGTGGCGT
CATCAATGTCGTGAGCAAATTGCCGGTTTTCACAAATTTCACGGATTTTTCACTGTCCGGCAATACGGCGCCGGGCGTGC
GTTCGACGATTGACGTCAACAGAACCTTTGGTGACATTGCGGCGCGTATTATCATTCTCGGCACCGATTGGGATACGGCG
GGACGTAATTTCATCGGGACCAAACGTGTCGGTGCGGCCCCTTCGATTGCTTTTCGGTTCACCGAGCAAACGAAGTTGAC
GCTCTCCTACATCTATCAACATGATGATAATGTGCCTGATTATGGCATTCCGATCGTTCCGGGGTCCATCTTCGGCACGT
CTTATGGCAAACCCGCGCCGGTTTCGAGAGGGACCTATTACGGGCAGCAGACGCCGGGCTTCAACGATACCGAAAAGGTC
GATGCGCATATCGTCACCGCTAAGCTGGAGCATGAATTCAACAAGGATTGGATGCTCACCAATGGGACGCGCTTTTCCAA
TGTCGATCGGTTCCTGCGTGCCCGCGCGCCTCAATGGGTGGCTTCCACCTCAGCTATTTACGCGCAGCCCGTCGGTGGAA
CGGCTCTGACCTCGCTCGCGGGTGTGCCGATCGGCAGTCTCTATTCGATCGACAATAATCATTTTCAAAATCATACGATC
AATAGCATGATCAGCAATCTGACCAATGTTGTCGGACATGAGGAGACTTGGGGACTCAAACATACAATCCAGATGGGCCT
CGATCTCAGTAAGGAAGATCGCTACAATGCGAGGCAGGCGACGAATAACACGACAGCGGCCACGACCAACCAGCGCATCA
ATCTTCTCTATCCAGACCCTTATCCATTTGGCAATAATTTCGGGCCGAATACAACTTTGACACGCACTGAGGCGCGTGAC
ATTGGTATGTATGTGTCCGATCAGGTCAAGTTTAATGATTATTTCGAACTGAAGGGCGGCTTCCGCTATGATTTCTACAA
GGCTTGGCAATTTACCGCCAATAGCAGCCGGGCGGATGGATCGCTGAGCCAGAATGGCACCACTCCATTCAATCTTTCAT
CCACCAATAATTTTGCAAGCTGGAATGGCTCCGCCCTGTTCCATCCGGCTCCCAATGCCACGCTTTATTATAGCTTTGGC
ACATCGGTAAATCCGCTTGCGGAATATACAACCATCACCAATGGTGGACAGAATCTCGGCGCGACAACGAATGAATCGCA
TGAGGTCGGTGCCAAGATTGATCTCTTCGACAGCCGGTTGAGCCTGACCGGCGCTGCATTCATGATCACCCAGAACAATG
CCGTCGAAACGATCGATGCCACGACCAGCCCGCCCACCGTGGCGCTTGTTGGTAAAACCAGGGTCAAGGGGATCGAAGTT
GGTGCCACCGGTGAAGTGACACCTGGATGGAATGTCTTTGCTGGCTATACTTATCTCGATGGCCGGCTTCTCCAGAGCCA
ACAATATGCGAACTTTGTCGGTAATGTCGTTCAGAATGTGCCGCGCAATCAGGCGTCCTTCTCGACAACCTATCAAGTGA
CGCCTGACTGGAAAATTGGCACCAGCGTGTATTTCGTGGATTCACGCTGGACGAATGTCCAACATGCGGGATGGGTGCCG
AGTTATTGGCGTTGGGACTTGATGACGAGCTATCAGGTTACCGAGAATTTCTCGCTGCAAGCCAATCTCTTCAACGTGCT
CAACACGACCAATTATGAATCGATCGCCGGCGCTGGCTTTGCCGTGCCAGGGGTTGGACGGTCTCTCCAGTTGACGGCAA
GACTGCACTGGTAA

Upstream 100 bases:

>100_bases
AGCTTGGTTGGCACGTGCGGATGCACGGCGCGGGCCGGCTTCGAGCATTCCCGACGGTCGCGCCTCCGACCGTTGGCATA
GCCTGAAGGAGTAGGCCGCA

Downstream 100 bases:

>100_bases
GTTTTGCTCACCCAGGGAAATCCTTGTCGAGGACATCCCTGGGAAAAGCCGTACTATGGCGTTGCCTTCTGGTTTTCTCG
CGTAGAGAGTCTGGGGGGCC

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MKRDEFEIFEGSAANTPATELYIKAKARPPLKNAVVGLASLMLGGGAATAQESTNLALEQIEVEAGNASNNGSAYNPRST
GLDRLPEPILDTAQSINVIPQQLLRDQQTTTMVEALRNVPGISINSAEGGTQGDNINIRGFSARNDIYRDGIREPAWYSR
DSFSVENIDVYKGPSSFIFGRGSTGGVINVVSKLPVFTNFTDFSLSGNTAPGVRSTIDVNRTFGDIAARIIILGTDWDTA
GRNFIGTKRVGAAPSIAFRFTEQTKLTLSYIYQHDDNVPDYGIPIVPGSIFGTSYGKPAPVSRGTYYGQQTPGFNDTEKV
DAHIVTAKLEHEFNKDWMLTNGTRFSNVDRFLRARAPQWVASTSAIYAQPVGGTALTSLAGVPIGSLYSIDNNHFQNHTI
NSMISNLTNVVGHEETWGLKHTIQMGLDLSKEDRYNARQATNNTTAATTNQRINLLYPDPYPFGNNFGPNTTLTRTEARD
IGMYVSDQVKFNDYFELKGGFRYDFYKAWQFTANSSRADGSLSQNGTTPFNLSSTNNFASWNGSALFHPAPNATLYYSFG
TSVNPLAEYTTITNGGQNLGATTNESHEVGAKIDLFDSRLSLTGAAFMITQNNAVETIDATTSPPTVALVGKTRVKGIEV
GATGEVTPGWNVFAGYTYLDGRLLQSQQYANFVGNVVQNVPRNQASFSTTYQVTPDWKIGTSVYFVDSRWTNVQHAGWVP
SYWRWDLMTSYQVTENFSLQANLFNVLNTTNYESIAGAGFAVPGVGRSLQLTARLHW

Sequences:

>Translated_777_residues
MKRDEFEIFEGSAANTPATELYIKAKARPPLKNAVVGLASLMLGGGAATAQESTNLALEQIEVEAGNASNNGSAYNPRST
GLDRLPEPILDTAQSINVIPQQLLRDQQTTTMVEALRNVPGISINSAEGGTQGDNINIRGFSARNDIYRDGIREPAWYSR
DSFSVENIDVYKGPSSFIFGRGSTGGVINVVSKLPVFTNFTDFSLSGNTAPGVRSTIDVNRTFGDIAARIIILGTDWDTA
GRNFIGTKRVGAAPSIAFRFTEQTKLTLSYIYQHDDNVPDYGIPIVPGSIFGTSYGKPAPVSRGTYYGQQTPGFNDTEKV
DAHIVTAKLEHEFNKDWMLTNGTRFSNVDRFLRARAPQWVASTSAIYAQPVGGTALTSLAGVPIGSLYSIDNNHFQNHTI
NSMISNLTNVVGHEETWGLKHTIQMGLDLSKEDRYNARQATNNTTAATTNQRINLLYPDPYPFGNNFGPNTTLTRTEARD
IGMYVSDQVKFNDYFELKGGFRYDFYKAWQFTANSSRADGSLSQNGTTPFNLSSTNNFASWNGSALFHPAPNATLYYSFG
TSVNPLAEYTTITNGGQNLGATTNESHEVGAKIDLFDSRLSLTGAAFMITQNNAVETIDATTSPPTVALVGKTRVKGIEV
GATGEVTPGWNVFAGYTYLDGRLLQSQQYANFVGNVVQNVPRNQASFSTTYQVTPDWKIGTSVYFVDSRWTNVQHAGWVP
SYWRWDLMTSYQVTENFSLQANLFNVLNTTNYESIAGAGFAVPGVGRSLQLTARLHW
>Mature_777_residues
MKRDEFEIFEGSAANTPATELYIKAKARPPLKNAVVGLASLMLGGGAATAQESTNLALEQIEVEAGNASNNGSAYNPRST
GLDRLPEPILDTAQSINVIPQQLLRDQQTTTMVEALRNVPGISINSAEGGTQGDNINIRGFSARNDIYRDGIREPAWYSR
DSFSVENIDVYKGPSSFIFGRGSTGGVINVVSKLPVFTNFTDFSLSGNTAPGVRSTIDVNRTFGDIAARIIILGTDWDTA
GRNFIGTKRVGAAPSIAFRFTEQTKLTLSYIYQHDDNVPDYGIPIVPGSIFGTSYGKPAPVSRGTYYGQQTPGFNDTEKV
DAHIVTAKLEHEFNKDWMLTNGTRFSNVDRFLRARAPQWVASTSAIYAQPVGGTALTSLAGVPIGSLYSIDNNHFQNHTI
NSMISNLTNVVGHEETWGLKHTIQMGLDLSKEDRYNARQATNNTTAATTNQRINLLYPDPYPFGNNFGPNTTLTRTEARD
IGMYVSDQVKFNDYFELKGGFRYDFYKAWQFTANSSRADGSLSQNGTTPFNLSSTNNFASWNGSALFHPAPNATLYYSFG
TSVNPLAEYTTITNGGQNLGATTNESHEVGAKIDLFDSRLSLTGAAFMITQNNAVETIDATTSPPTVALVGKTRVKGIEV
GATGEVTPGWNVFAGYTYLDGRLLQSQQYANFVGNVVQNVPRNQASFSTTYQVTPDWKIGTSVYFVDSRWTNVQHAGWVP
SYWRWDLMTSYQVTENFSLQANLFNVLNTTNYESIAGAGFAVPGVGRSLQLTARLHW

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=773, Percent_Identity=27.8137128072445, Blast_Score=255, Evalue=7e-69,
Organism=Escherichia coli, GI1786344, Length=691, Percent_Identity=22.8654124457308, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1787344, Length=797, Percent_Identity=24.2158092848181, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 84925; Mature: 84925

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDEFEIFEGSAANTPATELYIKAKARPPLKNAVVGLASLMLGGGAATAQESTNLALEQ
CCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
IEVEAGNASNNGSAYNPRSTGLDRLPEPILDTAQSINVIPQQLLRDQQTTTMVEALRNVP
EEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
GISINSAEGGTQGDNINIRGFSARNDIYRDGIREPAWYSRDSFSVENIDVYKGPSSFIFG
CCEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
RGSTGGVINVVSKLPVFTNFTDFSLSGNTAPGVRSTIDVNRTFGDIAARIIILGTDWDTA
CCCCCCHHHHHHHCCEEECCCEEEECCCCCCCCCEEEEECCCHHCEEEEEEEEECCCCCC
GRNFIGTKRVGAAPSIAFRFTEQTKLTLSYIYQHDDNVPDYGIPIVPGSIFGTSYGKPAP
CCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCC
VSRGTYYGQQTPGFNDTEKVDAHIVTAKLEHEFNKDWMLTNGTRFSNVDRFLRARAPQWV
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCE
ASTSAIYAQPVGGTALTSLAGVPIGSLYSIDNNHFQNHTINSMISNLTNVVGHEETWGLK
ECCCEEEEECCCCHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
HTIQMGLDLSKEDRYNARQATNNTTAATTNQRINLLYPDPYPFGNNFGPNTTLTRTEARD
EEHHHCCCCCCCCCCCHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCHHH
IGMYVSDQVKFNDYFELKGGFRYDFYKAWQFTANSSRADGSLSQNGTTPFNLSSTNNFAS
CCEEEECCEEECCEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCC
WNGSALFHPAPNATLYYSFGTSVNPLAEYTTITNGGQNLGATTNESHEVGAKIDLFDSRL
CCCCEEEECCCCCEEEEECCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCEEEEECCCE
SLTGAAFMITQNNAVETIDATTSPPTVALVGKTRVKGIEVGATGEVTPGWNVFAGYTYLD
EECEEEEEEECCCCEEEEECCCCCCEEEEEECCEECEEEECCCCCCCCCCCEEEEEEEEC
GRLLQSQQYANFVGNVVQNVPRNQASFSTTYQVTPDWKIGTSVYFVDSRWTNVQHAGWVP
CEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCEEEEEECCCCCCCCCCCCC
SYWRWDLMTSYQVTENFSLQANLFNVLNTTNYESIAGAGFAVPGVGRSLQLTARLHW
CCEEEEEEEEEEECCCCEEEEHHHHHHCCCCCHHHCCCCEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRDEFEIFEGSAANTPATELYIKAKARPPLKNAVVGLASLMLGGGAATAQESTNLALEQ
CCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
IEVEAGNASNNGSAYNPRSTGLDRLPEPILDTAQSINVIPQQLLRDQQTTTMVEALRNVP
EEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
GISINSAEGGTQGDNINIRGFSARNDIYRDGIREPAWYSRDSFSVENIDVYKGPSSFIFG
CCEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
RGSTGGVINVVSKLPVFTNFTDFSLSGNTAPGVRSTIDVNRTFGDIAARIIILGTDWDTA
CCCCCCHHHHHHHCCEEECCCEEEECCCCCCCCCEEEEECCCHHCEEEEEEEEECCCCCC
GRNFIGTKRVGAAPSIAFRFTEQTKLTLSYIYQHDDNVPDYGIPIVPGSIFGTSYGKPAP
CCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCC
VSRGTYYGQQTPGFNDTEKVDAHIVTAKLEHEFNKDWMLTNGTRFSNVDRFLRARAPQWV
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCE
ASTSAIYAQPVGGTALTSLAGVPIGSLYSIDNNHFQNHTINSMISNLTNVVGHEETWGLK
ECCCEEEEECCCCHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
HTIQMGLDLSKEDRYNARQATNNTTAATTNQRINLLYPDPYPFGNNFGPNTTLTRTEARD
EEHHHCCCCCCCCCCCHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCHHH
IGMYVSDQVKFNDYFELKGGFRYDFYKAWQFTANSSRADGSLSQNGTTPFNLSSTNNFAS
CCEEEECCEEECCEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCC
WNGSALFHPAPNATLYYSFGTSVNPLAEYTTITNGGQNLGATTNESHEVGAKIDLFDSRL
CCCCEEEECCCCCEEEEECCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCEEEEECCCE
SLTGAAFMITQNNAVETIDATTSPPTVALVGKTRVKGIEVGATGEVTPGWNVFAGYTYLD
EECEEEEEEECCCCEEEEECCCCCCEEEEEECCEECEEEECCCCCCCCCCCEEEEEEEEC
GRLLQSQQYANFVGNVVQNVPRNQASFSTTYQVTPDWKIGTSVYFVDSRWTNVQHAGWVP
CEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCEEEEEECCCCCCCCCCCCC
SYWRWDLMTSYQVTENFSLQANLFNVLNTTNYESIAGAGFAVPGVGRSLQLTARLHW
CCEEEEEEEEEEECCCCEEEEHHHHHHCCCCCHHHCCCCEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]