Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677231
Identifier: 182677231
GI number: 182677231
Start: 270471
End: 271742
Strand: Direct
Name: 182677231
Synonym: Bind_0232
Alternate gene names: NA
Gene position: 270471-271742 (Clockwise)
Preceding gene: 182677230
Following gene: 182677237
Centisome position: 6.49
GC content: 47.72
Gene sequence:
>1272_bases ATGGGAAACAAGCTGACAATGAGGATTGGTCAGGCTCTTACTTCGTTTCTGACGCTCCCACTATTTCTTTTGGTTCTTTT GGTGGCGCGACTGCTTCTGCTCGCTTTATTATTTTGGGTGACGGGGGGAAAAGAACTTGGCAATGACGTTGCCATGCATA TGACAATGATGCGCTCGCCATTTTGCATTTTGACTTATCAATATCCTGGCTACGAACAATACCCACCGTTTCTCCCTTTT CTGGAGCTCTTTCCCGCCTATCTCTTGCAATTTTTTCTGCCCGATTTCCTGTCATTCCGTTTGACCATGGTCGTTTACGA GATTCTGGTCGGCTTCCTCTTCTATCGGTTGATGATGAGGCTGGAATTCAGTCCAGGACGCTTTGGCCTTTGCCTGCTTG GTTTTCTCGCTCTGCCGATGGGGTGGATGACATCAATCGTCATGGCCCAGGATGTGGTGATCGTCACCGCCTTTTTGCTG CTTGCCATTCTTCTCTTCATATCCGGGCGACACAGGCTGGCCTTATTCTCCTGCGGGCTTGGCGTCATATGTGGCAAGCT TTTTATTATACTTGAGATTTTTACACTGCTCGCCTTCTGTTCCAGAAAGCGGATCATAGCTTATGGCGCGATCGGTTTAT CGCCGGTCATTCTCGTTTATGGTCTGATGTCCATTCACCGGATCATGCACGGCCTGCCGCTTCCCCTTGTAAGCTTCCGC CCAGACCCGTATTTTGGGACAAATTTCTGGATTCTCCTGAAAACCTATCGGCATCTGAGCTTCCAGGATTATGGTCCTTT TTCAGGAATGCTTGCCTTATCGGCTTCCCTGATTCCCGCTCTCATTATTTTCATCAAGGGTTTTGGACCGACGGATAGTA TGCGTGTCATCACCGCCAGTTCCGCCACCATTTTGATATTCTTTTCTTTATTTTATCACGTGAACCCAGAATATTTTATG ATGGTCTTTCCCTTGATGCTCATCGTTGGGCGCAACACAATCGATGCTGTCTATAGTGTGCTAATCTCAGCTGTGCCGTG GGCCGGCAAATTTTTCCAAAACGCCCAATTTCAAATGGGAGTCGAAGTTAACGAAGGCAAAGCCGTGGCCATGAAATATT ATATGGCAGTCTTCCATTCATCTCCCGAATATTGGCTGGCCGGGACACAGATCGTCTTTTCAATTCTCACGATCACTCTT TCGATTCGATTGTGTTTGCAATTGTTTGAGCCGAAGCAAAGCCAGCCGCAAACCCTGATTCAGAGCGCATGA
Upstream 100 bases:
>100_bases TCGGCTGCAACCAAGAATTGCTTGCTGACGCCGTGGACCACGCTTACGCAGAGCGTCCATAGCCGATAAGTTTTGCGACA TGTCTTGCAAAGGCCAGGAA
Downstream 100 bases:
>100_bases TGAAAAAGGCGGAAAGAGATCAGAAGCTCTTTGCTCGTGAACACCAACGGTCAAGTTTCTGTGACCGTTGGTGTTAAGAC CTGTTCAGATACAATCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MGNKLTMRIGQALTSFLTLPLFLLVLLVARLLLLALLFWVTGGKELGNDVAMHMTMMRSPFCILTYQYPGYEQYPPFLPF LELFPAYLLQFFLPDFLSFRLTMVVYEILVGFLFYRLMMRLEFSPGRFGLCLLGFLALPMGWMTSIVMAQDVVIVTAFLL LAILLFISGRHRLALFSCGLGVICGKLFIILEIFTLLAFCSRKRIIAYGAIGLSPVILVYGLMSIHRIMHGLPLPLVSFR PDPYFGTNFWILLKTYRHLSFQDYGPFSGMLALSASLIPALIIFIKGFGPTDSMRVITASSATILIFFSLFYHVNPEYFM MVFPLMLIVGRNTIDAVYSVLISAVPWAGKFFQNAQFQMGVEVNEGKAVAMKYYMAVFHSSPEYWLAGTQIVFSILTITL SIRLCLQLFEPKQSQPQTLIQSA
Sequences:
>Translated_423_residues MGNKLTMRIGQALTSFLTLPLFLLVLLVARLLLLALLFWVTGGKELGNDVAMHMTMMRSPFCILTYQYPGYEQYPPFLPF LELFPAYLLQFFLPDFLSFRLTMVVYEILVGFLFYRLMMRLEFSPGRFGLCLLGFLALPMGWMTSIVMAQDVVIVTAFLL LAILLFISGRHRLALFSCGLGVICGKLFIILEIFTLLAFCSRKRIIAYGAIGLSPVILVYGLMSIHRIMHGLPLPLVSFR PDPYFGTNFWILLKTYRHLSFQDYGPFSGMLALSASLIPALIIFIKGFGPTDSMRVITASSATILIFFSLFYHVNPEYFM MVFPLMLIVGRNTIDAVYSVLISAVPWAGKFFQNAQFQMGVEVNEGKAVAMKYYMAVFHSSPEYWLAGTQIVFSILTITL SIRLCLQLFEPKQSQPQTLIQSA >Mature_422_residues GNKLTMRIGQALTSFLTLPLFLLVLLVARLLLLALLFWVTGGKELGNDVAMHMTMMRSPFCILTYQYPGYEQYPPFLPFL ELFPAYLLQFFLPDFLSFRLTMVVYEILVGFLFYRLMMRLEFSPGRFGLCLLGFLALPMGWMTSIVMAQDVVIVTAFLLL AILLFISGRHRLALFSCGLGVICGKLFIILEIFTLLAFCSRKRIIAYGAIGLSPVILVYGLMSIHRIMHGLPLPLVSFRP DPYFGTNFWILLKTYRHLSFQDYGPFSGMLALSASLIPALIIFIKGFGPTDSMRVITASSATILIFFSLFYHVNPEYFMM VFPLMLIVGRNTIDAVYSVLISAVPWAGKFFQNAQFQMGVEVNEGKAVAMKYYMAVFHSSPEYWLAGTQIVFSILTITLS IRLCLQLFEPKQSQPQTLIQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47846; Mature: 47714
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKLTMRIGQALTSFLTLPLFLLVLLVARLLLLALLFWVTGGKELGNDVAMHMTMMRSP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCC FCILTYQYPGYEQYPPFLPFLELFPAYLLQFFLPDFLSFRLTMVVYEILVGFLFYRLMMR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEFSPGRFGLCLLGFLALPMGWMTSIVMAQDVVIVTAFLLLAILLFISGRHRLALFSCGL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCH GVICGKLFIILEIFTLLAFCSRKRIIAYGAIGLSPVILVYGLMSIHRIMHGLPLPLVSFR HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC PDPYFGTNFWILLKTYRHLSFQDYGPFSGMLALSASLIPALIIFIKGFGPTDSMRVITAS CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC SATILIFFSLFYHVNPEYFMMVFPLMLIVGRNTIDAVYSVLISAVPWAGKFFQNAQFQMG CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCEEEC VEVNEGKAVAMKYYMAVFHSSPEYWLAGTQIVFSILTITLSIRLCLQLFEPKQSQPQTLI EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH QSA CCC >Mature Secondary Structure GNKLTMRIGQALTSFLTLPLFLLVLLVARLLLLALLFWVTGGKELGNDVAMHMTMMRSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCC FCILTYQYPGYEQYPPFLPFLELFPAYLLQFFLPDFLSFRLTMVVYEILVGFLFYRLMMR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEFSPGRFGLCLLGFLALPMGWMTSIVMAQDVVIVTAFLLLAILLFISGRHRLALFSCGL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCH GVICGKLFIILEIFTLLAFCSRKRIIAYGAIGLSPVILVYGLMSIHRIMHGLPLPLVSFR HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC PDPYFGTNFWILLKTYRHLSFQDYGPFSGMLALSASLIPALIIFIKGFGPTDSMRVITAS CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC SATILIFFSLFYHVNPEYFMMVFPLMLIVGRNTIDAVYSVLISAVPWAGKFFQNAQFQMG CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCEEEC VEVNEGKAVAMKYYMAVFHSSPEYWLAGTQIVFSILTITLSIRLCLQLFEPKQSQPQTLI EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH QSA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA