Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is yegV [C]
Identifier: 182677214
GI number: 182677214
Start: 252475
End: 253476
Strand: Direct
Name: yegV [C]
Synonym: Bind_0215
Alternate gene names: 182677214
Gene position: 252475-253476 (Clockwise)
Preceding gene: 182677213
Following gene: 182677225
Centisome position: 6.05
GC content: 57.49
Gene sequence:
>1002_bases ATGGCTTCTCCCACATTGGATCTGCTTGGTTTCGGCAATGCTATTGTCGATGTTCTCGGCCAAGTCGATGATGATTTTCT CCTCGCTCAGGGCCTGCACAAAGGGTCGATGACCCTCATCGATGAGGCGCGCGCGACAAGCCTCTATGGCGCAATGGGAC CGGTGACCGTTGTTTCTGGTGGGTCGGCCGCCAATACGATCATTGGCGCCGCCGGCCTCGGCTGCAAAACGGGGTTCGTG GGCAAGCTCAAATCCGATCCGCTCGGCACCCAATTCGCCCATGATATTCGTGGCGCGAAGGTCGCCTTCACGACGTCATT CGCCGAGGATGGCCCGGCGAGCGCGACGTGCCTCGTCCTGGTTACGCCGGATGGCCAACGGACGATGAACACCTATCTTG GCGCCTCGGCCAATCTGACCGAGGCCGATGTCGATGCAGAGCAAGTGCAAAGCGCCGCTATCATCTATCTCGAAGGTTAT TTGTGGGATCCGCCAGCTGCCAAGGCGGCTTTCCTGAAGGCCTCGCGCATTGCTCGTGACGCTGGGCGGCAGGTGGCCCT GACCTTGTCCGATACATTCTGTGTCGATCGTTATCGCGAGGAGTTTTTAGGGCTTATCCGCGACAAATCCGTCCAAATTC TCTTCGCTAATGAATCCGAATTGCACGCGCTTTATCAGACCTCTGATTTCGATACGGCCATCGCGGCTCTGCGTCAGGAG AACATTCTCGGTGTCGTGACGCGCTCCGAACATGGCTCGGTGGTGGTCACATCGGAAAATGTGCTCGCTGTCCCAGCTTT TCCCGTGGATCAGGTGGTCGATACGACGGGCGCGGGCGATCTTTTCGCAGGGGGATTTTTGACGGGTCTCAGCAAGAACA AGGATCATTCAACAGCGGCAAGGCTTGGTGCCTTGGCGGCAGCTGAAATCATCCAGCATATCGGCGCGCGTCCGCAAAAG GATCTCGCCTATCTTGCCAGACAGAACGGTTTTGATCTCTGA
Upstream 100 bases:
>100_bases GATCGCGACCGTGCGGGCGGTCTATTCTCCTTCTTGACCCGGGCCATTGCCGATGCGAGAGCCAAGTTCGTTTCGAATGT CTCCCGGATCGGATGAATAG
Downstream 100 bases:
>100_bases TCATGACAATAAAAATGCGGAGAAGGGTTTTCCTTCTCCGCATGGAAAGCTTAAAGCTGAGACCATACCATCGGTTGATC TTTGGTCTTACAGCCAGGCG
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MASPTLDLLGFGNAIVDVLGQVDDDFLLAQGLHKGSMTLIDEARATSLYGAMGPVTVVSGGSAANTIIGAAGLGCKTGFV GKLKSDPLGTQFAHDIRGAKVAFTTSFAEDGPASATCLVLVTPDGQRTMNTYLGASANLTEADVDAEQVQSAAIIYLEGY LWDPPAAKAAFLKASRIARDAGRQVALTLSDTFCVDRYREEFLGLIRDKSVQILFANESELHALYQTSDFDTAIAALRQE NILGVVTRSEHGSVVVTSENVLAVPAFPVDQVVDTTGAGDLFAGGFLTGLSKNKDHSTAARLGALAAAEIIQHIGARPQK DLAYLARQNGFDL
Sequences:
>Translated_333_residues MASPTLDLLGFGNAIVDVLGQVDDDFLLAQGLHKGSMTLIDEARATSLYGAMGPVTVVSGGSAANTIIGAAGLGCKTGFV GKLKSDPLGTQFAHDIRGAKVAFTTSFAEDGPASATCLVLVTPDGQRTMNTYLGASANLTEADVDAEQVQSAAIIYLEGY LWDPPAAKAAFLKASRIARDAGRQVALTLSDTFCVDRYREEFLGLIRDKSVQILFANESELHALYQTSDFDTAIAALRQE NILGVVTRSEHGSVVVTSENVLAVPAFPVDQVVDTTGAGDLFAGGFLTGLSKNKDHSTAARLGALAAAEIIQHIGARPQK DLAYLARQNGFDL >Mature_332_residues ASPTLDLLGFGNAIVDVLGQVDDDFLLAQGLHKGSMTLIDEARATSLYGAMGPVTVVSGGSAANTIIGAAGLGCKTGFVG KLKSDPLGTQFAHDIRGAKVAFTTSFAEDGPASATCLVLVTPDGQRTMNTYLGASANLTEADVDAEQVQSAAIIYLEGYL WDPPAAKAAFLKASRIARDAGRQVALTLSDTFCVDRYREEFLGLIRDKSVQILFANESELHALYQTSDFDTAIAALRQEN ILGVVTRSEHGSVVVTSENVLAVPAFPVDQVVDTTGAGDLFAGGFLTGLSKNKDHSTAARLGALAAAEIIQHIGARPQKD LAYLARQNGFDL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI32484973, Length=341, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI32484975, Length=341, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17541820, Length=338, Percent_Identity=25.4437869822485, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322565, Length=344, Percent_Identity=26.453488372093, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571668, Length=346, Percent_Identity=24.2774566473988, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21355521, Length=339, Percent_Identity=25.9587020648968, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24663633, Length=335, Percent_Identity=23.8805970149254, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356339, Length=335, Percent_Identity=23.8805970149254, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 34924; Mature: 34793
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPTLDLLGFGNAIVDVLGQVDDDFLLAQGLHKGSMTLIDEARATSLYGAMGPVTVVSG CCCCCCHHHCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEEC GSAANTIIGAAGLGCKTGFVGKLKSDPLGTQFAHDIRGAKVAFTTSFAEDGPASATCLVL CCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEE VTPDGQRTMNTYLGASANLTEADVDAEQVQSAAIIYLEGYLWDPPAAKAAFLKASRIARD ECCCCCHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCHHHHHHHHHHHHHH AGRQVALTLSDTFCVDRYREEFLGLIRDKSVQILFANESELHALYQTSDFDTAIAALRQE CCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHC NILGVVTRSEHGSVVVTSENVLAVPAFPVDQVVDTTGAGDLFAGGFLTGLSKNKDHSTAA CEEEEEEECCCCCEEEECCCEEEECCCCHHHHHHCCCCCCHHHCHHHHCCCCCCCHHHHH RLGALAAAEIIQHIGARPQKDLAYLARQNGFDL HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ASPTLDLLGFGNAIVDVLGQVDDDFLLAQGLHKGSMTLIDEARATSLYGAMGPVTVVSG CCCCCHHHCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEEC GSAANTIIGAAGLGCKTGFVGKLKSDPLGTQFAHDIRGAKVAFTTSFAEDGPASATCLVL CCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEE VTPDGQRTMNTYLGASANLTEADVDAEQVQSAAIIYLEGYLWDPPAAKAAFLKASRIARD ECCCCCHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCHHHHHHHHHHHHHH AGRQVALTLSDTFCVDRYREEFLGLIRDKSVQILFANESELHALYQTSDFDTAIAALRQE CCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHC NILGVVTRSEHGSVVVTSENVLAVPAFPVDQVVDTTGAGDLFAGGFLTGLSKNKDHSTAA CEEEEEEECCCCCEEEECCCEEEECCCCHHHHHHCCCCCCHHHCHHHHCCCCCCCHHHHH RLGALAAAEIIQHIGARPQKDLAYLARQNGFDL HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]