Click here to switch to the map view.

The map label for this gene is 17935883

Identifier: 17935883

GI number: 17935883

Start: 1959143

End: 1959637

Strand: Reverse

Name: 17935883

Synonym: Atu1996

Alternate gene names: NA

Gene position: 1959637-1959143 (Counterclockwise)

Preceding gene: 159185008

Following gene: 159185005

Centisome position: 68.96

GC content: 62.22

Gene sequence:

>495_bases
ATGTCTCCGCAAAAGATTGGATTCCGGCGGGCCGGGGAGGTCTCAAGCGTGCGGAGAGGTGGGTGGTGCGCGTGGACGCG
ATTCCAGATTGGGTGGCGAAGGCGGCAATGCGGCGTCGAAGTTCACAAAGGCGACTTCGCCGATCGCAATGATCCGGTCC
GCGCGTTCGACGGGTGTGACCGGAAGAGTAGCGATCGTGGCCGATGCCAGTCGGCAGAGCGTGCCGCAGCAGTCGCCGGC
GATCTTGCCGGCCGGATTCTGCTTGCCCGCGCTGCCATCAGGCATGTGGCTGGAGCAGATGATTTCATCCGCCGCCAGCG
CGGCCATTGCCATGTTGCCGGTGGTCAGGCCATTGGCGAGACCCTGCAACAGGAAAAGCAGAATCGCCAGCGTGGCGATG
GCGCCCGCCGAACTCCTGTCCTGCATGATCCTGCGAATGAATCCCATGCAATCGCAATGTCATATTCGCGGCGAAATGTC
ACCGCGACACAATGA

Upstream 100 bases:

>100_bases
CCGGCGTAAAAATGCCAGCGCCACACGGCGCGGTAAAGATTGATGGATGACGACTGCGCAGGTGCGCGCTCGCCCTCGAA
AGAGGTCGTGACGGACATGA

Downstream 100 bases:

>100_bases
CGATACATGGTGGGTCGTTCTTCAGGCCAGCAGGTCGTAGGTGCGGAAAATCCACGCGATCTGGTAGACCAGCGCGAAAA
TCACGAGAAACCGGTGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSPQKIGFRRAGEVSSVRRGGWCAWTRFQIGWRRRQCGVEVHKGDFADRNDPVRAFDGCDRKSSDRGRCQSAERAAAVAG
DLAGRILLARAAIRHVAGADDFIRRQRGHCHVAGGQAIGETLQQEKQNRQRGDGARRTPVLHDPANESHAIAMSYSRRNV
TATQ

Sequences:

>Translated_164_residues
MSPQKIGFRRAGEVSSVRRGGWCAWTRFQIGWRRRQCGVEVHKGDFADRNDPVRAFDGCDRKSSDRGRCQSAERAAAVAG
DLAGRILLARAAIRHVAGADDFIRRQRGHCHVAGGQAIGETLQQEKQNRQRGDGARRTPVLHDPANESHAIAMSYSRRNV
TATQ
>Mature_163_residues
SPQKIGFRRAGEVSSVRRGGWCAWTRFQIGWRRRQCGVEVHKGDFADRNDPVRAFDGCDRKSSDRGRCQSAERAAAVAGD
LAGRILLARAAIRHVAGADDFIRRQRGHCHVAGGQAIGETLQQEKQNRQRGDGARRTPVLHDPANESHAIAMSYSRRNVT
ATQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18175; Mature: 18043

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQKIGFRRAGEVSSVRRGGWCAWTRFQIGWRRRQCGVEVHKGDFADRNDPVRAFDGCD
CCCCCCCCCCCCCHHHHCCCCCEEEEHHHHCHHHHHCCCEEECCCCCCCCCCCCHHCCCC
RKSSDRGRCQSAERAAAVAGDLAGRILLARAAIRHVAGADDFIRRQRGHCHVAGGQAIGE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCHHHHH
TLQQEKQNRQRGDGARRTPVLHDPANESHAIAMSYSRRNVTATQ
HHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SPQKIGFRRAGEVSSVRRGGWCAWTRFQIGWRRRQCGVEVHKGDFADRNDPVRAFDGCD
CCCCCCCCCCCCHHHHCCCCCEEEEHHHHCHHHHHCCCEEECCCCCCCCCCCCHHCCCC
RKSSDRGRCQSAERAAAVAGDLAGRILLARAAIRHVAGADDFIRRQRGHCHVAGGQAIGE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCHHHHH
TLQQEKQNRQRGDGARRTPVLHDPANESHAIAMSYSRRNVTATQ
HHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA