Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 17935653
Identifier: 17935653
GI number: 17935653
Start: 1745246
End: 1745536
Strand: Direct
Name: 17935653
Synonym: Atu1760
Alternate gene names: NA
Gene position: 1745246-1745536 (Clockwise)
Preceding gene: 15889060
Following gene: 159185435
Centisome position: 61.42
GC content: 51.2
Gene sequence:
>291_bases ATGAAGGTGCCGGAAACGAAAACAGCACGGTTTCCAGAGGAAAACCGCGCCGTTTCAAAACCCGTCATTCAGGAGAGAAG CTTATGGGCTGCCAAAAATGTACGTCAATGCGAGAAAAGCGGCAAAGCCTGCAAGTGCGCGTATGGTGACGCCCCAGCAG GATTTCTGAGCGGTTTCTTCCATGATTACTCCAGCTATTCACTCTCCGGGGGATCTTCAAGACCCGGCCCGTTGAGGCAA GCATTTATTAAAATCCGGCGGCGAACGCAAATGCAAAAAGCGGCTAAATGA
Upstream 100 bases:
>100_bases GAAACATGAAATATACCCTGCATATTGGATTTCTACCCATCATATCCAAAGCTGCAGCGGATCGCCACAAAAGAGCGGCA CCGGCTTTTGCAGCTGCGAC
Downstream 100 bases:
>100_bases AGGCGTTTTCGATAAGCTGCCATTCGCCCCATGCATAGGTCTGTGAAAAAACAAGGTGTTAGCAGCAGGCTTGAAAAGGC ACCGTTTGGGGCTCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKVPETKTARFPEENRAVSKPVIQERSLWAAKNVRQCEKSGKACKCAYGDAPAGFLSGFFHDYSSYSLSGGSSRPGPLRQ AFIKIRRRTQMQKAAK
Sequences:
>Translated_96_residues MKVPETKTARFPEENRAVSKPVIQERSLWAAKNVRQCEKSGKACKCAYGDAPAGFLSGFFHDYSSYSLSGGSSRPGPLRQ AFIKIRRRTQMQKAAK >Mature_96_residues MKVPETKTARFPEENRAVSKPVIQERSLWAAKNVRQCEKSGKACKCAYGDAPAGFLSGFFHDYSSYSLSGGSSRPGPLRQ AFIKIRRRTQMQKAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10697; Mature: 10697
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPETKTARFPEENRAVSKPVIQERSLWAAKNVRQCEKSGKACKCAYGDAPAGFLSGFF CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH HDYSSYSLSGGSSRPGPLRQAFIKIRRRTQMQKAAK HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVPETKTARFPEENRAVSKPVIQERSLWAAKNVRQCEKSGKACKCAYGDAPAGFLSGFF CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH HDYSSYSLSGGSSRPGPLRQAFIKIRRRTQMQKAAK HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA