Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889060
Identifier: 15889060
GI number: 15889060
Start: 1742384
End: 1742992
Strand: Direct
Name: 15889060
Synonym: Atu1757
Alternate gene names: NA
Gene position: 1742384-1742992 (Clockwise)
Preceding gene: 15889059
Following gene: 17935653
Centisome position: 61.32
GC content: 58.62
Gene sequence:
>609_bases ATGAACAAGAACAACCGTTTCGTATTCACTCTGATCGCATTCATCGTCAGCGCCTTCGCCCATCAGGCAAGCGCTTCGCC GGCCGCCGTCATGCGTGTGATCGGCAAGGCCAATCCGCCGATTGGTCACTATGAATTCTGCCAGACCTATCAGAGCGAAT GCCAGCCGACCTCGCTGGACAATGGCCCGTTGCAGCTGACCGAAGAGCGCTGGAAGACGATGCTCGACGTCAACTACACC GTCAACACCACGATCACGCCGATGACCGACATGGAAATCTATGGCGTTGAAGAGCGCTGGGCCTATCCCACCACCGTCGG CGATTGCGAAGATTTCGTGCTTCTGAAGCGCAAGATGCTGATGAACAAGGGCTTCTCTCCCTCCAACCTGCTGATCACCG TCGTTCTGCAGCCGAATGGCGAAGGCCACGCCGTTCTGACCGTCCGCACCGACCGTGGCGATTTCGTTCTCGACAACATG CGCAACAAGGTCATGAACTGGTCGGAAACCGAATACACCTACCTGAAGCGCCAGGACACGGCCAATCCGGGCCGCTGGGT GAAAATTCAGGACGGCCGCGCCACCGCGGCGGTCGGCGGCATCCGGTAA
Upstream 100 bases:
>100_bases GCCGCTAATTTGCTGAAATTTAAGCTCAAATTGCCTCACCTAAATTTCCGTCGGCTCAAAATATAACTGCGAATGTCTCC TCACCACGGGGAGACAAGCA
Downstream 100 bases:
>100_bases GTCACGGCAAGCCCCACAGCATACCGTCTCCGTCTCCCCAGATAAAAAGCCGGCTCCGCAAGGGCCGGCTTTTCATTTGC CGATGAACGCCTGACACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNKNNRFVFTLIAFIVSAFAHQASASPAAVMRVIGKANPPIGHYEFCQTYQSECQPTSLDNGPLQLTEERWKTMLDVNYT VNTTITPMTDMEIYGVEERWAYPTTVGDCEDFVLLKRKMLMNKGFSPSNLLITVVLQPNGEGHAVLTVRTDRGDFVLDNM RNKVMNWSETEYTYLKRQDTANPGRWVKIQDGRATAAVGGIR
Sequences:
>Translated_202_residues MNKNNRFVFTLIAFIVSAFAHQASASPAAVMRVIGKANPPIGHYEFCQTYQSECQPTSLDNGPLQLTEERWKTMLDVNYT VNTTITPMTDMEIYGVEERWAYPTTVGDCEDFVLLKRKMLMNKGFSPSNLLITVVLQPNGEGHAVLTVRTDRGDFVLDNM RNKVMNWSETEYTYLKRQDTANPGRWVKIQDGRATAAVGGIR >Mature_202_residues MNKNNRFVFTLIAFIVSAFAHQASASPAAVMRVIGKANPPIGHYEFCQTYQSECQPTSLDNGPLQLTEERWKTMLDVNYT VNTTITPMTDMEIYGVEERWAYPTTVGDCEDFVLLKRKMLMNKGFSPSNLLITVVLQPNGEGHAVLTVRTDRGDFVLDNM RNKVMNWSETEYTYLKRQDTANPGRWVKIQDGRATAAVGGIR
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22819; Mature: 22819
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNNRFVFTLIAFIVSAFAHQASASPAAVMRVIGKANPPIGHYEFCQTYQSECQPTSLD CCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC NGPLQLTEERWKTMLDVNYTVNTTITPMTDMEIYGVEERWAYPTTVGDCEDFVLLKRKML CCCEEECHHHHHEEEECCEEECCEECCCCCEEEEECHHHCCCCCCCCCHHHHHHHHHHHH MNKGFSPSNLLITVVLQPNGEGHAVLTVRTDRGDFVLDNMRNKVMNWSETEYTYLKRQDT HHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCCEEEEECCCC ANPGRWVKIQDGRATAAVGGIR CCCCCEEEEECCCEEEECCCCC >Mature Secondary Structure MNKNNRFVFTLIAFIVSAFAHQASASPAAVMRVIGKANPPIGHYEFCQTYQSECQPTSLD CCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC NGPLQLTEERWKTMLDVNYTVNTTITPMTDMEIYGVEERWAYPTTVGDCEDFVLLKRKML CCCEEECHHHHHEEEECCEEECCEECCCCCEEEEECHHHCCCCCCCCCHHHHHHHHHHHH MNKGFSPSNLLITVVLQPNGEGHAVLTVRTDRGDFVLDNMRNKVMNWSETEYTYLKRQDT HHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCCEEEEECCCC ANPGRWVKIQDGRATAAVGGIR CCCCCEEEEECCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA