Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17548041
Identifier: 17548041
GI number: 17548041
Start: 3586535
End: 3587107
Strand: Reverse
Name: 17548041
Synonym: RSc3324
Alternate gene names: NA
Gene position: 3587107-3586535 (Counterclockwise)
Preceding gene: 17548042
Following gene: 17548040
Centisome position: 96.52
GC content: 67.36
Gene sequence:
>573_bases ATGATGAAAGACGCTTCTTCCATGCAGCCAACCGAGCGGCAACGGCCCGATTCCCAAGCTTCGTCGGAAGACGCCCGGTC CAGGCCGGTGCCGGCTCCGAAGCGGGACTGGGATGCCGAAGACGCGGAGAAGGCGGGGCCGCCGGTGCATGCGCTTTCGC ATGACGAAGCGGTCGCCCTGTTCGGCGAGAAGGCCTTGCGGGCCTCGCGTGTCACGCCATTCTCCATCGTGCTCGGCCAG GTGGCCATCACACTGCTGTGTGCGCTCGGATGGTATGTCGGCAGCTGGCTCGCGGGCACGGGGGCTGCGTCGGCGGGCGA GGCGGCGTTGTCGGCCCTGCTGGGCGGCGGCGTCTGCGTGGTGCCTTCGGCCTGGTTCGCGCTGCGGCTGTCGAAGGCGC AGGGTTTCGAGTCCATCGCCCGGCTGGTGGTGGGCGAAGCGATCAAGGTGCTTGGCACCGTCGCGCTGCTGGTGGTCGTG GTCGTGACCTTCAAGGGCCTGCATTGGGCGCCCTTGCTGATCACCCTGATCCTGGCGCTCAAGATGTACTGGGTCGGTTT CGCATTGCGGTGA
Upstream 100 bases:
>100_bases AAGGCGCCCGCACGACCGTTCGGTTCGCGCGTTGACTGGTGACTGTCATGTCTCGTAAAATCGTGCGGTTTCAAATCCGC CTGACCCAAAGCGGTGCGGC
Downstream 100 bases:
>100_bases CCGGCCTTCGCCTGCGGCCATGCGGCAGGCAAGCGGGATGTGTCGGAACACGGCGGGAACCCGGGTGGCTGAAGCACCAG CCGGCACCGGTTCACTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP Synthase I Chain; F0F1-Type ATP Synthase Subunit I-Like Protein
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MMKDASSMQPTERQRPDSQASSEDARSRPVPAPKRDWDAEDAEKAGPPVHALSHDEAVALFGEKALRASRVTPFSIVLGQ VAITLLCALGWYVGSWLAGTGAASAGEAALSALLGGGVCVVPSAWFALRLSKAQGFESIARLVVGEAIKVLGTVALLVVV VVTFKGLHWAPLLITLILALKMYWVGFALR
Sequences:
>Translated_190_residues MMKDASSMQPTERQRPDSQASSEDARSRPVPAPKRDWDAEDAEKAGPPVHALSHDEAVALFGEKALRASRVTPFSIVLGQ VAITLLCALGWYVGSWLAGTGAASAGEAALSALLGGGVCVVPSAWFALRLSKAQGFESIARLVVGEAIKVLGTVALLVVV VVTFKGLHWAPLLITLILALKMYWVGFALR >Mature_190_residues MMKDASSMQPTERQRPDSQASSEDARSRPVPAPKRDWDAEDAEKAGPPVHALSHDEAVALFGEKALRASRVTPFSIVLGQ VAITLLCALGWYVGSWLAGTGAASAGEAALSALLGGGVCVVPSAWFALRLSKAQGFESIARLVVGEAIKVLGTVALLVVV VVTFKGLHWAPLLITLILALKMYWVGFALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20091; Mature: 20091
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKDASSMQPTERQRPDSQASSEDARSRPVPAPKRDWDAEDAEKAGPPVHALSHDEAVAL CCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHH FGEKALRASRVTPFSIVLGQVAITLLCALGWYVGSWLAGTGAASAGEAALSALLGGGVCV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH VPSAWFALRLSKAQGFESIARLVVGEAIKVLGTVALLVVVVVTFKGLHWAPLLITLILAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMYWVGFALR HHHHHHHCCC >Mature Secondary Structure MMKDASSMQPTERQRPDSQASSEDARSRPVPAPKRDWDAEDAEKAGPPVHALSHDEAVAL CCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHH FGEKALRASRVTPFSIVLGQVAITLLCALGWYVGSWLAGTGAASAGEAALSALLGGGVCV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH VPSAWFALRLSKAQGFESIARLVVGEAIKVLGTVALLVVVVVTFKGLHWAPLLITLILAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMYWVGFALR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA