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The map label for this gene is 17548021

Identifier: 17548021

GI number: 17548021

Start: 3567034

End: 3567501

Strand: Reverse

Name: 17548021

Synonym: RSc3304

Alternate gene names: NA

Gene position: 3567501-3567034 (Counterclockwise)

Preceding gene: 17548024

Following gene: 17548020

Centisome position: 95.99

GC content: 71.37

Gene sequence:

>468_bases
ATGCATCGCAAGCGCTGTCTGGGATGGCTGCGGGCCGCGGGTGTCGTGGCCGCGTCGGCAATGTGTCCGGGGGCATGGGC
GCAGGCTTCGGCACCGGCGGCCGCGCCACCGCTCGCCCCGCAGATCATCGACATGGGCGCCATGACCGCCGCCGACATCG
GCCCCATCGTGCCCGACATGGGGACGCTGCGCACCAGGGGGCTGGTGGCGACCGCCAGCGGGACCGTGGGCATCCAGGCC
GGCACCGTCGTCAAGCACACGCATGCCTATTCCGACGAGATCCAGTACGTGATGGCCGGCACCGCCACCGTGTGGCTCGA
CAACGGGCCGCGCGAGGTGCACGCGGGCGACCTGATCGTGATCCCGCGCGGCGTCGTGCACGGGACGTTGGCGACCAGCG
CGGACTTCAGGGCGATGGCGATCAAGCTGCCGCCGCAGCGCTCGGGGGATACCCAGAAAGTCCCCTGA

Upstream 100 bases:

>100_bases
ATTCGCCCTAGGTCTGCCGCCATGCGTGGCGATGCGACAATCGGCTCCGATGCGCCGCGCCGGATGGCGGCCATGACCAC
TGACCACGGAGGAGGGGAGC

Downstream 100 bases:

>100_bases
GGGGATGGCGCGAGCCGTGTGCGTCACGGGCGGCGTTCGGGGCACTCCGGCGCGCAGCCGCGCGGCGCGGCGCGCGCGTG
GCCGTCCGGCCGCCGATCCC

Product: signal peptide protein

Products: NA

Alternate protein names: CupinCupin Region; Cupin 2 Conserved Barrel Domain Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MHRKRCLGWLRAAGVVAASAMCPGAWAQASAPAAAPPLAPQIIDMGAMTAADIGPIVPDMGTLRTRGLVATASGTVGIQA
GTVVKHTHAYSDEIQYVMAGTATVWLDNGPREVHAGDLIVIPRGVVHGTLATSADFRAMAIKLPPQRSGDTQKVP

Sequences:

>Translated_155_residues
MHRKRCLGWLRAAGVVAASAMCPGAWAQASAPAAAPPLAPQIIDMGAMTAADIGPIVPDMGTLRTRGLVATASGTVGIQA
GTVVKHTHAYSDEIQYVMAGTATVWLDNGPREVHAGDLIVIPRGVVHGTLATSADFRAMAIKLPPQRSGDTQKVP
>Mature_155_residues
MHRKRCLGWLRAAGVVAASAMCPGAWAQASAPAAAPPLAPQIIDMGAMTAADIGPIVPDMGTLRTRGLVATASGTVGIQA
GTVVKHTHAYSDEIQYVMAGTATVWLDNGPREVHAGDLIVIPRGVVHGTLATSADFRAMAIKLPPQRSGDTQKVP

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15999; Mature: 15999

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRKRCLGWLRAAGVVAASAMCPGAWAQASAPAAAPPLAPQIIDMGAMTAADIGPIVPDM
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCC
GTLRTRGLVATASGTVGIQAGTVVKHTHAYSDEIQYVMAGTATVWLDNGPREVHAGDLIV
CCCCCCCEEEECCCCEEEECCCEEEECCCCCCCEEEEEECEEEEEECCCCCEECCCCEEE
IPRGVVHGTLATSADFRAMAIKLPPQRSGDTQKVP
ECCCCEECEECCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MHRKRCLGWLRAAGVVAASAMCPGAWAQASAPAAAPPLAPQIIDMGAMTAADIGPIVPDM
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCC
GTLRTRGLVATASGTVGIQAGTVVKHTHAYSDEIQYVMAGTATVWLDNGPREVHAGDLIV
CCCCCCCEEEECCCCEEEECCCEEEECCCCCCCEEEEEECEEEEEECCCCCEECCCCEEE
IPRGVVHGTLATSADFRAMAIKLPPQRSGDTQKVP
ECCCCEECEECCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA