Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is trxC [C]
Identifier: 17547503
GI number: 17547503
Start: 2995284
End: 2995808
Strand: Direct
Name: trxC [C]
Synonym: RSc2784
Alternate gene names: 17547503
Gene position: 2995284-2995808 (Clockwise)
Preceding gene: 17547502
Following gene: 17547504
Centisome position: 80.6
GC content: 67.81
Gene sequence:
>525_bases ATGTCCCGACGCCAAACCCTGATCGCCCTCATCCTGGCCGGCATCGTCGCCGCGGTGCTGGGCGTGTACGCCGGCCATCG GGCCACGCAGCCCAGGCCGCCGGCCGACGGTGCCGTCACCGCGTTCTTCGATGCCAGGCTGCCGGACGCCAACGGCACGC CGATCGACCTCTCGGCATTCCGCGGCCAGCCGGTGGTGATCAATTTCTGGGCGCCCTGGTGCGGCCCTTGCGTGGAGGAG ATGCCGGAGCTGTCGGCGTTGGCGCAAGAGCAGAAGGCCCGGGTGAAGTTCATCGGGATCGGAATCGATTCGGCGGCCAA CATTCAGGCGTTCCTGGGCAAGGTGCCGGTCACCTACCCCATCGCCGTGGCCGGTTTCGGAGGCACCGAATTGGGGCGGC AGCTCGGCAACCAGGCCGGCGGCCTGCCCTTTACCGTGATTCTGAATGCACAGGGCGAGATCACGTTCCGCAAGATGGGC CGCGTCCACGCCGACGAACTGCGTGCCGCCTTGCAGCGTACGTGA
Upstream 100 bases:
>100_bases TCGCAGCCGTGCGCGCGCTGCTCCCGGAAGGGTGACCGGCAGGAGGAGTACAATCCGCCCCGCCGCCGCTCTCTATATAG ACTGCGCCTCCACCTCCAGC
Downstream 100 bases:
>100_bases ATCCGTAATAACGTCATATGGCCGTCATGTGCGCGTAACATCCCTCCTTCCCGCACCAAATCCGGCAGCACATGCGCAAC ATCGGTGAAAACACCGATTT
Product: thioredoxin-related transmembrane protein
Products: NA
Alternate protein names: Thioredoxin; Redoxin Domain Protein; Thioredoxin Family Protein; Thioredoxin-Related Transmembrane Protein; Redoxin; ThiolDisulfide Interchange Protein; ThiolDisulfide Interchange Protein TlpA; Antioxidant AhpC/TSA Family; Redoxin Protein; Thiol-Disulfide Oxidoreductase; Thiol-Disulfide Isomerase And Thioredoxins-Like; Thiol-Disulfide Oxidoreductase ResA; Thioredoxin-Like Protein; Thiol-Disulfide Isomerase-Like Thioredoxin; Thiol-Disulfide Isomerase And Thioredoxins-Like Protein; Redoxin Superfamily Protein; Thiol Disulfide Exchange Role In Cytochrome C Biogenesis; ThiolDisulfide InterChange Protein TlpA; ThiolDisulfide Interchange Protein DsbE; Disulfide Reductase TlpA-Like Family; Thioredoxin-Like Protein Disulfide Reductase; Cytochrome C Assembly Protein; Disulfide Reductase Tlpa-Like Family; Peroxiredoxin-Like; Cytochrome C Biogenesis Protein CycX-Like Protein; Thiol-Disulfide Oxidoreductases ResA/TlpA/DsbE; Thiol-Disulfide Interchange Protein; Thiol-Disulfide Isomerase And Thioredoxin; Tat Domain-Containing Protein; Thiol-Disulfide Isomerase-Like Protein; ThiolDisulfide Interchange Protein HelX; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Family; ThiolDisulfide Interchange Protein DsbD; Secreted Protein; ThiolDisulfide Interchange Protein Like Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSRRQTLIALILAGIVAAVLGVYAGHRATQPRPPADGAVTAFFDARLPDANGTPIDLSAFRGQPVVINFWAPWCGPCVEE MPELSALAQEQKARVKFIGIGIDSAANIQAFLGKVPVTYPIAVAGFGGTELGRQLGNQAGGLPFTVILNAQGEITFRKMG RVHADELRAALQRT
Sequences:
>Translated_174_residues MSRRQTLIALILAGIVAAVLGVYAGHRATQPRPPADGAVTAFFDARLPDANGTPIDLSAFRGQPVVINFWAPWCGPCVEE MPELSALAQEQKARVKFIGIGIDSAANIQAFLGKVPVTYPIAVAGFGGTELGRQLGNQAGGLPFTVILNAQGEITFRKMG RVHADELRAALQRT >Mature_173_residues SRRQTLIALILAGIVAAVLGVYAGHRATQPRPPADGAVTAFFDARLPDANGTPIDLSAFRGQPVVINFWAPWCGPCVEEM PELSALAQEQKARVKFIGIGIDSAANIQAFLGKVPVTYPIAVAGFGGTELGRQLGNQAGGLPFTVILNAQGEITFRKMGR VHADELRAALQRT
Specific function: Efficient Electron Donor For The Essential Enzyme Ribonucleotide Reductase. Is Also Able To Reduce The Interchain Disulfide Bridges Of Insulin. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 18449; Mature: 18317
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRQTLIALILAGIVAAVLGVYAGHRATQPRPPADGAVTAFFDARLPDANGTPIDLSAF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHHC RGQPVVINFWAPWCGPCVEEMPELSALAQEQKARVKFIGIGIDSAANIQAFLGKVPVTYP CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHCCCCCEEE IAVAGFGGTELGRQLGNQAGGLPFTVILNAQGEITFRKMGRVHADELRAALQRT EEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure SRRQTLIALILAGIVAAVLGVYAGHRATQPRPPADGAVTAFFDARLPDANGTPIDLSAF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHHC RGQPVVINFWAPWCGPCVEEMPELSALAQEQKARVKFIGIGIDSAANIQAFLGKVPVTYP CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHCCCCCEEE IAVAGFGGTELGRQLGNQAGGLPFTVILNAQGEITFRKMGRVHADELRAALQRT EEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA