Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is phcB
Identifier: 17547454
GI number: 17547454
Start: 2943414
End: 2944817
Strand: Direct
Name: phcB
Synonym: RSc2735
Alternate gene names: NA
Gene position: 2943414-2944817 (Clockwise)
Preceding gene: 17547453
Following gene: 17547455
Centisome position: 79.2
GC content: 65.03
Gene sequence:
>1404_bases GTGTACTCTCCCAACCAAATCGATCCGGCAGTCAGCTTCCGCAACTCCCAGGGTCAGCAGGTTCGCGGCACCATCATCAC GCTGCAGCGGCGCGCCCTGGTGATGGAGGTCTACAACCCCTATTCCATCGTGCAGGTCAGCGAGGTCCTCTCCGACCTGG CCATCAAGATGGGCACGCGCCAGGCCTACATCGGCAAGGCGGTGGTGGTCAGCCTGGTCAACACCGGCCTCACCGCCGTG GTGTCCGTCACCCTGACGGAAGAATGGCGCGGGCTGGCCGATGTCCAGGACAGCCCCAAACTGGTCGGCGACGAAGCCCG GGCGTTCGTCCAGGACTGGGAAGAGCGGTTCCGCATCCGGCACAACTACCAGATCGTCGTCAATGAAATGCGGGCGTTCC TGGCCGAAGTGTCGCGCTGGGTGGAACAGGTCGACCTGTCCGAATCGCTGCCCAAGGACGGCCACGGCAAATTGCGCATG GACGTGTTCCAGGAGCTGGCCGAGCCGATCATGTACAAGATCAAGCACTACCTCGACTGGCTCGAATCGGAGGCTGCCGA GGTGGAGCCGGAGCTCGCGCCGTCCCACCGGACATTCGCCCAGACGGCGTTGCACCCGCTGCTGCTGCGCGCGCCCTTCG TCTATCGCACCTACACCAAGCCGCTCGGATACGCCGGCGATTACGAGATGGTCAACCAGATCCTCTCCGATCCCCGCGAA GGGCCGAGCACCTACTTCCAGATCGTCAACGCCACCTTCCTGAGCGCCGCGGTAGCGCGCGCGCACCGCAACCGCATCGA TATCCTGGTCAACTATCTCGGCGAGCTTGCGGCCCGTGCGCAGGCGGCCGGGCGCCGGTTCAAGGTGCTGAACGTCGGAT GCGGCCCGGCCGCGGAAATCCAGCGCTTCATCCGCGAACACCCCGAGCCGGACCGGCTCGCGTTCCGGCTCGTCGACTTC AGCGAGGAAACCCTCGAATACACGCGCAAGGAGATGGATGGCGTACAGCACGCGGCCAAGAAACAGGTGGACATCGAGTT CGTGCACGAATCCGTCCACCAGTTGCTCAAGCGGCGTGTGGCGCCGGGCACGCCCGAGGCGGGCGAATTCGATGCGGTGT ACTGCGCCGGCCTGTTCGACTATCTGTCCGACAAGGTGTGCAGCCGGTTGCTGGCCTACTTCGCCGCCAGCACACGCCAG GGCGGCACCGTGCTCGCGACCAACGTGCACAGCAACAACCCGGAGAAGCTGGGCATGGAGCACCTGCTGGAGTGGTATCT GGTCTACCGGGACGAAGAGCGCATGACGACCCTGCTGCCGCCGGGCTCGGAGCAGGTCCGCGTCTTCACCGACGATACCG GTGTCAACGTGTTCGCCCACGCCGACGTGGCAGCCATCGCCTGA
Upstream 100 bases:
>100_bases CCGCCAGACCGGGACCGCGGTGCGGTTCCGGGTGCATGGTAGTGGAGTGAGCTTCCCGCTGGATGGACGTTTCTCCTGAA GTCTCCGGCAAATTCGCACC
Downstream 100 bases:
>100_bases GAGCGCACGCACCATGATCGCCGCCAACTACCAGGGCTATCACCAGGAGCTGTCCGATCTGCGGCTGGCCTTCAGCCGCA GCGGAGCCGTCACGGGCGTC
Product: regulatory protein
Products: NA
Alternate protein names: Methyltransferase Type; SAM-Dependent Methyltransferase; MCP Methyltransferase CheR-Type; Regulatory Protein Sam-Dependent Methyltransferase Domain; Methyltransferase; SAM-Dependent Methyltransferases; Two Component Protein; Methyltransferase Domain Family; Regulatory Protein SAM-Dependent Methyltransferase Domain
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MYSPNQIDPAVSFRNSQGQQVRGTIITLQRRALVMEVYNPYSIVQVSEVLSDLAIKMGTRQAYIGKAVVVSLVNTGLTAV VSVTLTEEWRGLADVQDSPKLVGDEARAFVQDWEERFRIRHNYQIVVNEMRAFLAEVSRWVEQVDLSESLPKDGHGKLRM DVFQELAEPIMYKIKHYLDWLESEAAEVEPELAPSHRTFAQTALHPLLLRAPFVYRTYTKPLGYAGDYEMVNQILSDPRE GPSTYFQIVNATFLSAAVARAHRNRIDILVNYLGELAARAQAAGRRFKVLNVGCGPAAEIQRFIREHPEPDRLAFRLVDF SEETLEYTRKEMDGVQHAAKKQVDIEFVHESVHQLLKRRVAPGTPEAGEFDAVYCAGLFDYLSDKVCSRLLAYFAASTRQ GGTVLATNVHSNNPEKLGMEHLLEWYLVYRDEERMTTLLPPGSEQVRVFTDDTGVNVFAHADVAAIA
Sequences:
>Translated_467_residues MYSPNQIDPAVSFRNSQGQQVRGTIITLQRRALVMEVYNPYSIVQVSEVLSDLAIKMGTRQAYIGKAVVVSLVNTGLTAV VSVTLTEEWRGLADVQDSPKLVGDEARAFVQDWEERFRIRHNYQIVVNEMRAFLAEVSRWVEQVDLSESLPKDGHGKLRM DVFQELAEPIMYKIKHYLDWLESEAAEVEPELAPSHRTFAQTALHPLLLRAPFVYRTYTKPLGYAGDYEMVNQILSDPRE GPSTYFQIVNATFLSAAVARAHRNRIDILVNYLGELAARAQAAGRRFKVLNVGCGPAAEIQRFIREHPEPDRLAFRLVDF SEETLEYTRKEMDGVQHAAKKQVDIEFVHESVHQLLKRRVAPGTPEAGEFDAVYCAGLFDYLSDKVCSRLLAYFAASTRQ GGTVLATNVHSNNPEKLGMEHLLEWYLVYRDEERMTTLLPPGSEQVRVFTDDTGVNVFAHADVAAIA >Mature_467_residues MYSPNQIDPAVSFRNSQGQQVRGTIITLQRRALVMEVYNPYSIVQVSEVLSDLAIKMGTRQAYIGKAVVVSLVNTGLTAV VSVTLTEEWRGLADVQDSPKLVGDEARAFVQDWEERFRIRHNYQIVVNEMRAFLAEVSRWVEQVDLSESLPKDGHGKLRM DVFQELAEPIMYKIKHYLDWLESEAAEVEPELAPSHRTFAQTALHPLLLRAPFVYRTYTKPLGYAGDYEMVNQILSDPRE GPSTYFQIVNATFLSAAVARAHRNRIDILVNYLGELAARAQAAGRRFKVLNVGCGPAAEIQRFIREHPEPDRLAFRLVDF SEETLEYTRKEMDGVQHAAKKQVDIEFVHESVHQLLKRRVAPGTPEAGEFDAVYCAGLFDYLSDKVCSRLLAYFAASTRQ GGTVLATNVHSNNPEKLGMEHLLEWYLVYRDEERMTTLLPPGSEQVRVFTDDTGVNVFAHADVAAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52736; Mature: 52736
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPNQIDPAVSFRNSQGQQVRGTIITLQRRALVMEVYNPYSIVQVSEVLSDLAIKMGTR CCCCCCCCCHHHCCCCCCCEEHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC QAYIGKAVVVSLVNTGLTAVVSVTLTEEWRGLADVQDSPKLVGDEARAFVQDWEERFRIR HHHHHHHHHHHHHHCCHHHEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HNYQIVVNEMRAFLAEVSRWVEQVDLSESLPKDGHGKLRMDVFQELAEPIMYKIKHYLDW CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LESEAAEVEPELAPSHRTFAQTALHPLLLRAPFVYRTYTKPLGYAGDYEMVNQILSDPRE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCCCC GPSTYFQIVNATFLSAAVARAHRNRIDILVNYLGELAARAQAAGRRFKVLNVGCGPAAEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH QRFIREHPEPDRLAFRLVDFSEETLEYTRKEMDGVQHAAKKQVDIEFVHESVHQLLKRRV HHHHHHCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC APGTPEAGEFDAVYCAGLFDYLSDKVCSRLLAYFAASTRQGGTVLATNVHSNNPEKLGME CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH HLLEWYLVYRDEERMTTLLPPGSEQVRVFTDDTGVNVFAHADVAAIA HHHHHHHHEECCCCEEEECCCCCCCEEEEECCCCCEEEEECCHHHCC >Mature Secondary Structure MYSPNQIDPAVSFRNSQGQQVRGTIITLQRRALVMEVYNPYSIVQVSEVLSDLAIKMGTR CCCCCCCCCHHHCCCCCCCEEHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC QAYIGKAVVVSLVNTGLTAVVSVTLTEEWRGLADVQDSPKLVGDEARAFVQDWEERFRIR HHHHHHHHHHHHHHCCHHHEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HNYQIVVNEMRAFLAEVSRWVEQVDLSESLPKDGHGKLRMDVFQELAEPIMYKIKHYLDW CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LESEAAEVEPELAPSHRTFAQTALHPLLLRAPFVYRTYTKPLGYAGDYEMVNQILSDPRE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCCCC GPSTYFQIVNATFLSAAVARAHRNRIDILVNYLGELAARAQAAGRRFKVLNVGCGPAAEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH QRFIREHPEPDRLAFRLVDFSEETLEYTRKEMDGVQHAAKKQVDIEFVHESVHQLLKRRV HHHHHHCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC APGTPEAGEFDAVYCAGLFDYLSDKVCSRLLAYFAASTRQGGTVLATNVHSNNPEKLGME CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH HLLEWYLVYRDEERMTTLLPPGSEQVRVFTDDTGVNVFAHADVAAIA HHHHHHHHEECCCCEEEECCCCCCCEEEEECCCCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA