Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17547423
Identifier: 17547423
GI number: 17547423
Start: 2910296
End: 2910538
Strand: Direct
Name: 17547423
Synonym: RSc2704
Alternate gene names: NA
Gene position: 2910296-2910538 (Clockwise)
Preceding gene: 17547422
Following gene: 17547428
Centisome position: 78.31
GC content: 60.49
Gene sequence:
>243_bases GTGGGCCCGCGTCATTTGAGAGAGATCGGCATGACACTCTGCTCGGCTTGCCTGGCCATCGAAGTCCGTAGACGCGGCGC GCCAGGCCATGCTTTGCTAAGAATCACCGACACGCAACGCATCAAGTCGTCCAAGGCAGTTGCCGTCACGGTAAGCACGT TCGCATGCCCCACCTGCGGTGCGCGGTGGATCTACCGCGACGAGAAGAACGTGGACAATCAAGGGTGGTCGCTCGAGCAA TAG
Upstream 100 bases:
>100_bases TGAAGTATGGTGCCCCAGTCTTTGGCGTCTAGCCTGGAGACAGTACGGCTGAACGAATCCTTGTCCAACGCGGCAACCCA TCACAAGCCAGCGCGCTACA
Downstream 100 bases:
>100_bases GAGCCATCGCGGCCGAGGACTCACTGGATTCGAGCCCTCGCAGCCGGCCCTCCCTGCCATGCAGGGCGGCGAATGACGCG ATGCGCTGGGTGACATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MGPRHLREIGMTLCSACLAIEVRRRGAPGHALLRITDTQRIKSSKAVAVTVSTFACPTCGARWIYRDEKNVDNQGWSLEQ
Sequences:
>Translated_80_residues MGPRHLREIGMTLCSACLAIEVRRRGAPGHALLRITDTQRIKSSKAVAVTVSTFACPTCGARWIYRDEKNVDNQGWSLEQ >Mature_79_residues GPRHLREIGMTLCSACLAIEVRRRGAPGHALLRITDTQRIKSSKAVAVTVSTFACPTCGARWIYRDEKNVDNQGWSLEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8899; Mature: 8768
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPRHLREIGMTLCSACLAIEVRRRGAPGHALLRITDTQRIKSSKAVAVTVSTFACPTCG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCC ARWIYRDEKNVDNQGWSLEQ CEEEECCCCCCCCCCCCCCC >Mature Secondary Structure GPRHLREIGMTLCSACLAIEVRRRGAPGHALLRITDTQRIKSSKAVAVTVSTFACPTCG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCC ARWIYRDEKNVDNQGWSLEQ CEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA