Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17547422
Identifier: 17547422
GI number: 17547422
Start: 2909829
End: 2910227
Strand: Direct
Name: 17547422
Synonym: RSc2703
Alternate gene names: NA
Gene position: 2909829-2910227 (Clockwise)
Preceding gene: 17547404
Following gene: 17547423
Centisome position: 78.3
GC content: 61.4
Gene sequence:
>399_bases ATGCGGCCCGCCGTGCGGGAAGGGCTGCCATCGCGCGTCTCGCCTCCCGTCACAAGAACTGAGCCGTGCAAGTCGCCTGG CGTGACTTTCACGCTTGCTGCAGCGACACTGCGTTACCTCGAATTCAACGAGAAGGAAATCACCATGTCTGTTTGCGATG AATGGGAAGAACTGCATCTGACGCCCGAGGGCTGGAAGGATGGCAGCTATCGGCACGAGCCAGGCGCCGCAGTCATCATC GCGCCACCGGTCAATGAAGTGCTGACGGTGCGCCGGCATGTGGCTGCCGTGTATGGCGGTCCGTCGCGCGTCACGGAGGA CCGGACACCGCGCACGGATGACATGAGCCAGATCGAGCAGTTACTGTTGAAGTATGGTGCCCCAGTCTTTGGCGTCTAG
Upstream 100 bases:
>100_bases GCCACCTACCTCATCAGTGAGTACAGAGACGGTCTGGAGCGCATCCTAGCCAACGTCTCGATGCGCCCAAGCGTCCATGG CACGGAAGCACGCGCAAGAA
Downstream 100 bases:
>100_bases CCTGGAGACAGTACGGCTGAACGAATCCTTGTCCAACGCGGCAACCCATCACAAGCCAGCGCGCTACAGTGGGCCCGCGT CATTTGAGAGAGATCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MRPAVREGLPSRVSPPVTRTEPCKSPGVTFTLAAATLRYLEFNEKEITMSVCDEWEELHLTPEGWKDGSYRHEPGAAVII APPVNEVLTVRRHVAAVYGGPSRVTEDRTPRTDDMSQIEQLLLKYGAPVFGV
Sequences:
>Translated_132_residues MRPAVREGLPSRVSPPVTRTEPCKSPGVTFTLAAATLRYLEFNEKEITMSVCDEWEELHLTPEGWKDGSYRHEPGAAVII APPVNEVLTVRRHVAAVYGGPSRVTEDRTPRTDDMSQIEQLLLKYGAPVFGV >Mature_132_residues MRPAVREGLPSRVSPPVTRTEPCKSPGVTFTLAAATLRYLEFNEKEITMSVCDEWEELHLTPEGWKDGSYRHEPGAAVII APPVNEVLTVRRHVAAVYGGPSRVTEDRTPRTDDMSQIEQLLLKYGAPVFGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14646; Mature: 14646
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAVREGLPSRVSPPVTRTEPCKSPGVTFTLAAATLRYLEFNEKEITMSVCDEWEELHL CCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEHHHHHHHHHHCCC TPEGWKDGSYRHEPGAAVIIAPPVNEVLTVRRHVAAVYGGPSRVTEDRTPRTDDMSQIEQ CCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LLLKYGAPVFGV HHHHHCCCCCCC >Mature Secondary Structure MRPAVREGLPSRVSPPVTRTEPCKSPGVTFTLAAATLRYLEFNEKEITMSVCDEWEELHL CCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEHHHHHHHHHHCCC TPEGWKDGSYRHEPGAAVIIAPPVNEVLTVRRHVAAVYGGPSRVTEDRTPRTDDMSQIEQ CCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LLLKYGAPVFGV HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA