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The map label for this gene is 17547392

Identifier: 17547392

GI number: 17547392

Start: 2881885

End: 2882583

Strand: Direct

Name: 17547392

Synonym: RSc2673

Alternate gene names: NA

Gene position: 2881885-2882583 (Clockwise)

Preceding gene: 17547391

Following gene: 17547402

Centisome position: 77.54

GC content: 69.96

Gene sequence:

>699_bases
ATGCGCCGCATGACCCGCCGCGCCGACCGCCTCTTCCAGATCGCGCAGATCCTGCGCGGCCGCCGCCTGACCACGGCGGC
GATGCTGGCCGACCGGCTGGGCGTGTCCGAGCGCACGGTGTATCGCGACATCCGCGACCTGTCGGTCTCGGGCGTGCCGA
TCGAGGGCGAGGCCGGCATCGGCTACCGCATGCGGGCCGGCTTCGACCTCGCGCCGCTGATGTTCACGACCGATGAAGTG
GAGGCGCTGGTCGCCGGGGCACGGATGATCAAGGCGTGGAGCGGCGGCGCGATGGCCAGCTCGGTCGAGGCCGCGCTGGA
AAAACTGATGGGCGCCCTGCCCGCCGAGCGCCGTACCGAAGCCGAGACCACGCGCATCTTCGCGCCCAGCTTCGGCATGA
ACCACGACGTCAGGCACGCGTTTGACGCGCTGCATGCCGCGCTCAGCCGCCACGCGGTGGCGCGGCTTGCCTACCGCGAT
GCGCAGGGCCAGTTGACCGACCGCTGCATCCAGCCGCTCGGCCTGTTCTTCTGGGGACAGGTCTGGCTGGTCGCCGCATG
GTGCGAGCACCGCCAGGACTACCGCACCTTCCGCCTCGACCGCTGTGTCAAGGTCGACATCCTGGCGCGGCATTTCGCTG
AATCCGCCGAGCGCTCGCTGGCGGACTTCATGCGCAAGGTGAAGGGTTCGACGGACTAG

Upstream 100 bases:

>100_bases
GCAGGTCGACATCGTCGACATCCATCCCGAACGCGAACTGACGCCCTTCGGTGCGTAGGGGCAAACCGCGCGCGTTGCAG
GCGGCGACAGGACCACTACA

Downstream 100 bases:

>100_bases
GTCCGGCGCGCGCCGATCAAAGCGGATCCGGCTCCGCCAGCAGCGTCTCGATATCGCCGAGCATCTCCTCGGGCTTGGTC
AGCGGCGCGTAGCGCTTGTA

Product: repressor transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; DeoR-Family Transcriptional Regulator; Transcription Regulator Protein; Regulatory Protein; HTH Domain Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; HTH Domain-Containing Protein; Regulatory Protein DeoR; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; DeoR-Family Protein Transcriptional Regulator; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; DeoR-Like Helix-Turn-Helix Domain Protein; Transriptional Regulator DeoR Family; NB-Dependent Receptor; Regulatory Protein Deor; HTH Type; LOW QUALITY PROTEIN Helix-Turn-Helix Type; Deor-Like Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRRMTRRADRLFQIAQILRGRRLTTAAMLADRLGVSERTVYRDIRDLSVSGVPIEGEAGIGYRMRAGFDLAPLMFTTDEV
EALVAGARMIKAWSGGAMASSVEAALEKLMGALPAERRTEAETTRIFAPSFGMNHDVRHAFDALHAALSRHAVARLAYRD
AQGQLTDRCIQPLGLFFWGQVWLVAAWCEHRQDYRTFRLDRCVKVDILARHFAESAERSLADFMRKVKGSTD

Sequences:

>Translated_232_residues
MRRMTRRADRLFQIAQILRGRRLTTAAMLADRLGVSERTVYRDIRDLSVSGVPIEGEAGIGYRMRAGFDLAPLMFTTDEV
EALVAGARMIKAWSGGAMASSVEAALEKLMGALPAERRTEAETTRIFAPSFGMNHDVRHAFDALHAALSRHAVARLAYRD
AQGQLTDRCIQPLGLFFWGQVWLVAAWCEHRQDYRTFRLDRCVKVDILARHFAESAERSLADFMRKVKGSTD
>Mature_232_residues
MRRMTRRADRLFQIAQILRGRRLTTAAMLADRLGVSERTVYRDIRDLSVSGVPIEGEAGIGYRMRAGFDLAPLMFTTDEV
EALVAGARMIKAWSGGAMASSVEAALEKLMGALPAERRTEAETTRIFAPSFGMNHDVRHAFDALHAALSRHAVARLAYRD
AQGQLTDRCIQPLGLFFWGQVWLVAAWCEHRQDYRTFRLDRCVKVDILARHFAESAERSLADFMRKVKGSTD

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26103; Mature: 26103

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMTRRADRLFQIAQILRGRRLTTAAMLADRLGVSERTVYRDIRDLSVSGVPIEGEAGI
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
GYRMRAGFDLAPLMFTTDEVEALVAGARMIKAWSGGAMASSVEAALEKLMGALPAERRTE
CEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
AETTRIFAPSFGMNHDVRHAFDALHAALSRHAVARLAYRDAQGQLTDRCIQPLGLFFWGQ
HHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VWLVAAWCEHRQDYRTFRLDRCVKVDILARHFAESAERSLADFMRKVKGSTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRMTRRADRLFQIAQILRGRRLTTAAMLADRLGVSERTVYRDIRDLSVSGVPIEGEAGI
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
GYRMRAGFDLAPLMFTTDEVEALVAGARMIKAWSGGAMASSVEAALEKLMGALPAERRTE
CEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCH
AETTRIFAPSFGMNHDVRHAFDALHAALSRHAVARLAYRDAQGQLTDRCIQPLGLFFWGQ
HHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VWLVAAWCEHRQDYRTFRLDRCVKVDILARHFAESAERSLADFMRKVKGSTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA