Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is ada [H]
Identifier: 17547289
GI number: 17547289
Start: 2778230
End: 2779312
Strand: Direct
Name: ada [H]
Synonym: RSc2570
Alternate gene names: 17547289
Gene position: 2778230-2779312 (Clockwise)
Preceding gene: 17547288
Following gene: 17547290
Centisome position: 74.76
GC content: 73.22
Gene sequence:
>1083_bases TTGACGTCATCCGACACCATGCCAACGCCCGCACCGTCCACCATCGAACACGACCCGCGCTGGGCCCGCGTGCTCGCGCG CGATGCGTCCGCCGACGGCCAGTTCGTCTACGCCGTGAAGACCACGGGCGTGTACTGCCAGCCGAGCAGCCCGTCGCGGC TGCCGCGCCCCGAGAACGTCGAATTCTTCGACACGCCCGCCGAGGCCGAGGCCGCCGGCTATCGCCCCAGCCGCCGCGCC ACGCCGGACCAGACCACGGCCCGCGCGCAGCACGCCGCGCGGGTCGCCGCCGCGTGCCGCCGCATCGAAGCAGCCGACAC GCCGCCCGCGCTCGAAGCGCTCGCGCGGGAGGCCGGCCTGAGCCCGTACCACTTCCACCGGCTGTTCAAGACCGTCACCG GCCTGACGCCCAAGGCCTACGCCGCGGCGCACCGTGCGCGCAAGCTGCGCGCGCAGCTCGGCCGCGGCAGCTCCGTCACC GAGGCCATCTACGACGCCGGCTTCAATGCCAGCAGCCGCTTCTACGAGGCGTCCGACGGCGTGCTCGGCATGACGGCCAG CCGCTACCGCGCGGGCGGCGCGCAGACGACGATCCGCTTTGCCGTGGGCGAATGCTCGCTGGGCGCGATCCTGGTGGCGC AGAGCGAACGCGGCATCTGCGCGATCCTGCTGGGCGAGGATCCGCAGGCACTGGTGCACGACCTGCAGGACCAGTTCCCC AAGGCCGAACTGATCGGCGGTGACGCGGATTTCGAAGACCTGGTCGCCAGGGTGGTCGGGCTGATCGAAGCGCCCTCGAT CGGGCTGGACCTGCCGCTGGACGTGCGCGGCACCGCGTTCCAGGAGCGCGTGTGGCAGGCATTGCGCGAGATTCCGCCCG GCACCACGGCGAGCTACGCGGAGATCGCCGCGCGCATCGGCGCGCCCAGGGCGGTGCGCGCGGTGGCGCAGGCGTGCGGC GCCAACCATCTGGCGGTGGCCATCCCCTGCCACCGCGTGGTGCGCAGCGACGGCCAGCTCTCCGGCTACCGCTGGGGCGT GGAGCGCAAGCGCGCGCTGCTGGAGCGCGAAGCGCAAGGCTGA
Upstream 100 bases:
>100_bases CGCATGCCGGCCGGCTGAAGCGCCGCCGCCGCCGCGCCGAATTCGACCGCAAGCGGCGGAGTGCCCCTGACCGGGCACGC GCCTACAGTACAGGCATCGA
Downstream 100 bases:
>100_bases TGACGGCGAAGACCTGGACGCTGCTCGGCGCCAGCGGCAAACCGTACGACAGCCCCATCCCCGGCACGCTGGGCGGCCAC CGGCGCGCGCGCATCTACGA
Product: bifunctional methylated-DNA--protein-cysteine methyltransferase/O-6-methylguanine-DNA transcription regulator
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTSSDTMPTPAPSTIEHDPRWARVLARDASADGQFVYAVKTTGVYCQPSSPSRLPRPENVEFFDTPAEAEAAGYRPSRRA TPDQTTARAQHAARVAAACRRIEAADTPPALEALAREAGLSPYHFHRLFKTVTGLTPKAYAAAHRARKLRAQLGRGSSVT EAIYDAGFNASSRFYEASDGVLGMTASRYRAGGAQTTIRFAVGECSLGAILVAQSERGICAILLGEDPQALVHDLQDQFP KAELIGGDADFEDLVARVVGLIEAPSIGLDLPLDVRGTAFQERVWQALREIPPGTTASYAEIAARIGAPRAVRAVAQACG ANHLAVAIPCHRVVRSDGQLSGYRWGVERKRALLEREAQG
Sequences:
>Translated_360_residues MTSSDTMPTPAPSTIEHDPRWARVLARDASADGQFVYAVKTTGVYCQPSSPSRLPRPENVEFFDTPAEAEAAGYRPSRRA TPDQTTARAQHAARVAAACRRIEAADTPPALEALAREAGLSPYHFHRLFKTVTGLTPKAYAAAHRARKLRAQLGRGSSVT EAIYDAGFNASSRFYEASDGVLGMTASRYRAGGAQTTIRFAVGECSLGAILVAQSERGICAILLGEDPQALVHDLQDQFP KAELIGGDADFEDLVARVVGLIEAPSIGLDLPLDVRGTAFQERVWQALREIPPGTTASYAEIAARIGAPRAVRAVAQACG ANHLAVAIPCHRVVRSDGQLSGYRWGVERKRALLEREAQG >Mature_359_residues TSSDTMPTPAPSTIEHDPRWARVLARDASADGQFVYAVKTTGVYCQPSSPSRLPRPENVEFFDTPAEAEAAGYRPSRRAT PDQTTARAQHAARVAAACRRIEAADTPPALEALAREAGLSPYHFHRLFKTVTGLTPKAYAAAHRARKLRAQLGRGSSVTE AIYDAGFNASSRFYEASDGVLGMTASRYRAGGAQTTIRFAVGECSLGAILVAQSERGICAILLGEDPQALVHDLQDQFPK AELIGGDADFEDLVARVVGLIEAPSIGLDLPLDVRGTAFQERVWQALREIPPGTTASYAEIAARIGAPRAVRAVAQACGA NHLAVAIPCHRVVRSDGQLSGYRWGVERKRALLEREAQG
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG2169
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788542, Length=348, Percent_Identity=52.2988505747126, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1787596, Length=93, Percent_Identity=44.0860215053763, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533070, Length=131, Percent_Identity=42.7480916030534, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115533068, Length=131, Percent_Identity=42.7480916030534, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320001, Length=84, Percent_Identity=45.2380952380952, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI17137554, Length=173, Percent_Identity=35.2601156069364, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 38615; Mature: 38484
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSDTMPTPAPSTIEHDPRWARVLARDASADGQFVYAVKTTGVYCQPSSPSRLPRPENV CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCC EFFDTPAEAEAAGYRPSRRATPDQTTARAQHAARVAAACRRIEAADTPPALEALAREAGL CEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SPYHFHRLFKTVTGLTPKAYAAAHRARKLRAQLGRGSSVTEAIYDAGFNASSRFYEASDG CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCC VLGMTASRYRAGGAQTTIRFAVGECSLGAILVAQSERGICAILLGEDPQALVHDLQDQFP EEECCHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCC KAELIGGDADFEDLVARVVGLIEAPSIGLDLPLDVRGTAFQERVWQALREIPPGTTASYA CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH EIAARIGAPRAVRAVAQACGANHLAVAIPCHRVVRSDGQLSGYRWGVERKRALLEREAQG HHHHHHCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEECCHHHHHHHHHHHCCC >Mature Secondary Structure TSSDTMPTPAPSTIEHDPRWARVLARDASADGQFVYAVKTTGVYCQPSSPSRLPRPENV CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCC EFFDTPAEAEAAGYRPSRRATPDQTTARAQHAARVAAACRRIEAADTPPALEALAREAGL CEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SPYHFHRLFKTVTGLTPKAYAAAHRARKLRAQLGRGSSVTEAIYDAGFNASSRFYEASDG CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCC VLGMTASRYRAGGAQTTIRFAVGECSLGAILVAQSERGICAILLGEDPQALVHDLQDQFP EEECCHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCC KAELIGGDADFEDLVARVVGLIEAPSIGLDLPLDVRGTAFQERVWQALREIPPGTTASYA CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH EIAARIGAPRAVRAVAQACGANHLAVAIPCHRVVRSDGQLSGYRWGVERKRALLEREAQG HHHHHHCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]