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The map label for this gene is tISRso11a [C]

Identifier: 17546985

GI number: 17546985

Start: 2457507

End: 2457935

Strand: Reverse

Name: tISRso11a [C]

Synonym: RSc2266

Alternate gene names: 17546985

Gene position: 2457935-2457507 (Counterclockwise)

Preceding gene: 17546986

Following gene: 17546984

Centisome position: 66.14

GC content: 60.61

Gene sequence:

>429_bases
GTGATCCGGCGCTGGATCAACGCGTGGCAGCGCCATGGGAAATCCGGACTACGCAAGAAGCATGAAGCGTATAGCGCCGA
GTTCAAGCTGACGGTGCTGCAGCGCATGTGGCGCGACGAGTTGTCCTATCAGCAAGTCAGCGCTGTGTTCGATTTGCGTG
AGGCTGGCGGCGTCAGCCGCTGGGACCGCCAGTATCATGAGGGCGGTTTCGACGCCCTACAGCCGCGCCGCAAAGGCGGG
GCACCCATCATGTCCCAGTCCAAGCAAGATCCCCAACCCGCTGCGCAGCCGGCTCAAGACGAGCGCTCGCGCGAGGATTT
GCTCAAAGAGAACGAGTGTTTGCGCGCGGAGGTGGCGTACCTAAAAAAGTTAGATGCCCTGCTGCGTGCCAAACAGCAGC
AGGCACCAAAGAAAAAGCGCAAGTCGTGA

Upstream 100 bases:

>100_bases
TCAGTATGAAGAGGCGTTCAAGCGCCAAGTAGTTCAGGAGTATTTGAGGGGGGCCGTTGGGACCGCAGGGCTGAGCCAGA
AGTACGGGATAGGCCGTTCT

Downstream 100 bases:

>100_bases
GTGCGCTGCGTGAGCGGCATTCATTGTCGAGCTTGCTCAAGGCCGCGAATCTCGCACGCAGCACGTACTACTACCAGATG
GCGACAGGCCAGGCAGAGGA

Product: ISRSO11-transposase orfA protein

Products: NA

Alternate protein names: ISPsy8 Transposase OrfA; Transposase IS3/IS; ISRSO11-Transposase OrfA Protein; ISEch2 OrfA; ISBma4 Transposase; ISPsy9 Like Transposase; Insertion Sequence OrfA; ISPsy9 Transposase OrfA; Insertion Element

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGG
APIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLDALLRAKQQQAPKKKRKS

Sequences:

>Translated_142_residues
MIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGG
APIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLDALLRAKQQQAPKKKRKS
>Mature_142_residues
MIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSRWDRQYHEGGFDALQPRRKGG
APIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAYLKKLDALLRAKQQQAPKKKRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789980, Length=130, Percent_Identity=32.3076923076923, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16589; Mature: 16589

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
WDRQYHEGGFDALQPRRKGGAPIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAY
HHHHHHCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKKLDALLRAKQQQAPKKKRKS
HHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure
MIRRWINAWQRHGKSGLRKKHEAYSAEFKLTVLQRMWRDELSYQQVSAVFDLREAGGVSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
WDRQYHEGGFDALQPRRKGGAPIMSQSKQDPQPAAQPAQDERSREDLLKENECLRAEVAY
HHHHHHCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKKLDALLRAKQQQAPKKKRKS
HHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA