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The map label for this gene is 17546519

Identifier: 17546519

GI number: 17546519

Start: 1936388

End: 1937593

Strand: Direct

Name: 17546519

Synonym: RSc1800

Alternate gene names: NA

Gene position: 1936388-1937593 (Clockwise)

Preceding gene: 17546518

Following gene: 17546520

Centisome position: 52.1

GC content: 70.56

Gene sequence:

>1206_bases
GTGCCATTCTTTCCACCGGAGATCTGGACGGAAATCGCGCGCGGCACCAAGCCCGCGGACATGCAAAGCCTGCGCGCCGT
CAGCCGGGCGGTGAAGATGGGCGCCGAGGCCAGCATCCCGCAACTGACCATCACGCACCGGGACAGCGGCAAAAGGCCGC
CGTCCGTGGCCGGTTGCCTGGAGCTGAATCGGCTGACGCTCGTCGGCCATTTCACGGATGCCTACCTGCAGAGGTTGCCG
GCTTCCCTCACGGCGCTGGACCTGAGCCGATGCGAGGGCCCGATCACGTCCGCCGGGATCGCCCGCCTGCTGGCGCTGCC
GCTGGAACGGCTGGATGTCAGCGGCTGCGGGCTGGATGCCGAAAGCGCGCGGCTGCTGGCGAGCCACCCGACGCTGACCG
TGCTCAACATCTCCCGCAACGCGATCGGCGACGACGGTGCCGCTGCCTTGGCGGCCAACCCGAAGCTGACCTCGCTCAAT
GTCGGCCGCAACGGGATCAGTGACGCCGGCGCGCGCGCGTTGGTTGCCTGCGCCGGGCTGACCAAGCTCGATATCAGCGA
CAACAGGATCGGCGATGCGGGCGCGCGGGCGCTGGCCGGCAGCGCCAAGCTGAACAAACTCGATGCCGGCGACTGCGGGA
TCGGCCCCGAGGGCGCTCGGGCACTGGCCGCCAGCCAGACGCTCACCCGACTGGACCTGCGCTACAACGAGATCGGGGTC
GGGGGGGCCGAGGCGCTGGCCGCGAATCCCCGGCTCACCAGCCTCAACGTCTGCGGCAATGCGCTGGGGAGCGCGGGCGC
GGCGCTGCTGGCAGCCAGTGCCGCGCTCACCGAGCTCGACATCGGCAACAACGGCATCGGCAACGCGGGGGCGCGGGCCC
TCGGCGCCAATGCCACGCTCGTCAAGCTGAGTGTCGCCAACAACGGCATCGAGGAGGCAGGGGCGCGAGCGCTGGCGGCC
AGCACCACGCTCACCGCGCTGGACATCGGCAGCAACCGGATCGGGGATGCCGGTGCGCAGGCCCTGGCTGCCAACGATAC
GCTCGTCACCCTGGATGCCAGCGCCAACTGGATCGGAGACCCGGGCGCGCTGGCGCTGGCCGACAACACCCGGCTGGCCA
CGCTCAATGTCGGCGCCAACCGGATCGGCGAAGCGGGCATGCGGGCACTGGAGGCCAGCACCACGCTGGCCGTGCTCAAG
ACGTGA

Upstream 100 bases:

>100_bases
CGCGCCTGCGTCCCAGCCGGCAAGGCCGGCCCGGGCGCCGGCTGGGTCATCGATCCTGCGGGGCCTGGCGCGCCTGCGGG
CGCGGTGGGTGGCACCGCCG

Downstream 100 bases:

>100_bases
GGCACCGCCATCGGGCCCGGCCGGGCTTCGGCCCGCGTATGCTCAAGCGCGATGGCGCGCGGCCGGGCATCGGGTGCCGT
GCGGCGCATGCGCTGTGCGG

Product: GALA protein

Products: NA

Alternate protein names: GALA Protein; Type III Effector; Leucine-Rich Repeat-Containing Ribonuclease Inhibitor; Type III Effector Gala6 Protein; Type III Effector Protein

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPFFPPEIWTEIARGTKPADMQSLRAVSRAVKMGAEASIPQLTITHRDSGKRPPSVAGCLELNRLTLVGHFTDAYLQRLP
ASLTALDLSRCEGPITSAGIARLLALPLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAANPKLTSLN
VGRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCGIGPEGARALAASQTLTRLDLRYNEIGV
GGAEALAANPRLTSLNVCGNALGSAGAALLAASAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAA
STTLTALDIGSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALEASTTLAVLK
T

Sequences:

>Translated_401_residues
MPFFPPEIWTEIARGTKPADMQSLRAVSRAVKMGAEASIPQLTITHRDSGKRPPSVAGCLELNRLTLVGHFTDAYLQRLP
ASLTALDLSRCEGPITSAGIARLLALPLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAANPKLTSLN
VGRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCGIGPEGARALAASQTLTRLDLRYNEIGV
GGAEALAANPRLTSLNVCGNALGSAGAALLAASAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAA
STTLTALDIGSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALEASTTLAVLK
T
>Mature_400_residues
PFFPPEIWTEIARGTKPADMQSLRAVSRAVKMGAEASIPQLTITHRDSGKRPPSVAGCLELNRLTLVGHFTDAYLQRLPA
SLTALDLSRCEGPITSAGIARLLALPLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAANPKLTSLNV
GRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCGIGPEGARALAASQTLTRLDLRYNEIGVG
GAEALAANPRLTSLNVCGNALGSAGAALLAASAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAAS
TTLTALDIGSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALEASTTLAVLKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118918429, Length=356, Percent_Identity=36.5168539325843, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI168986655, Length=294, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI289666778, Length=227, Percent_Identity=30.8370044052863, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI42822874, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI42822872, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI42822870, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI42822868, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI42822866, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI42822864, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI21361547, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI42794608, Length=297, Percent_Identity=28.6195286195286, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI11545912, Length=252, Percent_Identity=31.7460317460317, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI119395764, Length=246, Percent_Identity=27.6422764227642, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI34878693, Length=246, Percent_Identity=27.6422764227642, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI21955154, Length=289, Percent_Identity=27.681660899654, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71980576, Length=349, Percent_Identity=27.2206303724928, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508137, Length=248, Percent_Identity=27.0161290322581, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17136634, Length=303, Percent_Identity=25.4125412541254, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21358607, Length=286, Percent_Identity=22.027972027972, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24667524, Length=346, Percent_Identity=27.1676300578035, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40379; Mature: 40248

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFPPEIWTEIARGTKPADMQSLRAVSRAVKMGAEASIPQLTITHRDSGKRPPSVAGCL
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHE
ELNRLTLVGHFTDAYLQRLPASLTALDLSRCEGPITSAGIARLLALPLERLDVSGCGLDA
EECEEEEEECHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
ESARLLASHPTLTVLNISRNAIGDDGAAALAANPKLTSLNVGRNGISDAGARALVACAGL
HHCCEEECCCCEEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCC
TKLDISDNRIGDAGARALAGSAKLNKLDAGDCGIGPEGARALAASQTLTRLDLRYNEIGV
EEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCC
GGAEALAANPRLTSLNVCGNALGSAGAALLAASAALTELDIGNNGIGNAGARALGANATL
CCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHCCCCCEE
VKLSVANNGIEEAGARALAASTTLTALDIGSNRIGDAGAQALAANDTLVTLDASANWIGD
EEEEECCCCHHHHCCCEEECCCEEEEEECCCCCCCCHHCCEEECCCEEEEEECCCCCCCC
PGALALADNTRLATLNVGANRIGEAGMRALEASTTLAVLKT
CCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
PFFPPEIWTEIARGTKPADMQSLRAVSRAVKMGAEASIPQLTITHRDSGKRPPSVAGCL
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHE
ELNRLTLVGHFTDAYLQRLPASLTALDLSRCEGPITSAGIARLLALPLERLDVSGCGLDA
EECEEEEEECHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
ESARLLASHPTLTVLNISRNAIGDDGAAALAANPKLTSLNVGRNGISDAGARALVACAGL
HHCCEEECCCCEEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCC
TKLDISDNRIGDAGARALAGSAKLNKLDAGDCGIGPEGARALAASQTLTRLDLRYNEIGV
EEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCC
GGAEALAANPRLTSLNVCGNALGSAGAALLAASAALTELDIGNNGIGNAGARALGANATL
CCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHCCCCCEE
VKLSVANNGIEEAGARALAASTTLTALDIGSNRIGDAGAQALAANDTLVTLDASANWIGD
EEEEECCCCHHHHCCCEEECCCEEEEEECCCCCCCCHHCCEEECCCEEEEEECCCCCCCC
PGALALADNTRLATLNVGANRIGEAGMRALEASTTLAVLKT
CCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA