Definition | Ralstonia solanacearum GMI1000, complete genome. |
---|---|
Accession | NC_003295 |
Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546396
Identifier: 17546396
GI number: 17546396
Start: 1795626
End: 1795823
Strand: Direct
Name: 17546396
Synonym: RSc1677
Alternate gene names: NA
Gene position: 1795626-1795823 (Clockwise)
Preceding gene: 17546395
Following gene: 17546397
Centisome position: 48.32
GC content: 65.66
Gene sequence:
>198_bases ATGGACTATCCAATCGAACCGATCGACGCAATCGAGCGGCGGGGCCGCTCGGCCATGTGCAATGGCCTTGAGCCCGAGAT GTGCCCCTACGACTACGACAGCGCGCACTGGCGCGCGTGGCAAGTCGGCTTCCTGGCCGCCGCCCTCGAGGTAGCGACTG CCGCTGCCGTGTGTGTCGATGACGAGGTGGCTGCATGA
Upstream 100 bases:
>100_bases CCGCGTATCGCAATCAGATCTGCGCTGACACGTCGCCCGAATTCGTGGCGACGTTCGACGTGCTGTGCGAGGCCGACGCC GGCCCGCAGTGAGGTATCCC
Downstream 100 bases:
>100_bases CCGCCGCATTCGTAATCACTGGCGATGAATGGCAGGCGCTGGCCGCCGTCGACCATCTCGCGTGCCGCCTCTACCTGGTG CTGCGGCGTTGCATGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MDYPIEPIDAIERRGRSAMCNGLEPEMCPYDYDSAHWRAWQVGFLAAALEVATAAAVCVDDEVAA
Sequences:
>Translated_65_residues MDYPIEPIDAIERRGRSAMCNGLEPEMCPYDYDSAHWRAWQVGFLAAALEVATAAAVCVDDEVAA >Mature_65_residues MDYPIEPIDAIERRGRSAMCNGLEPEMCPYDYDSAHWRAWQVGFLAAALEVATAAAVCVDDEVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7133; Mature: 7133
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPIEPIDAIERRGRSAMCNGLEPEMCPYDYDSAHWRAWQVGFLAAALEVATAAAVCVD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DEVAA CCCCC >Mature Secondary Structure MDYPIEPIDAIERRGRSAMCNGLEPEMCPYDYDSAHWRAWQVGFLAAALEVATAAAVCVD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DEVAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA