Click here to switch to the map view.

The map label for this gene is 17546395

Identifier: 17546395

GI number: 17546395

Start: 1795207

End: 1795617

Strand: Direct

Name: 17546395

Synonym: RSc1676

Alternate gene names: NA

Gene position: 1795207-1795617 (Clockwise)

Preceding gene: 17546394

Following gene: 17546396

Centisome position: 48.3

GC content: 64.96

Gene sequence:

>411_bases
ATGACGCAACGTTCGCTGACCTGGTCGCCGGAGCCACCGCGTTTCTTTGCGGACATGACGTGCTGTAAGCCGGCCCGCGT
ATCGGTTGGGCTTGCGTGCAAGCGTCCCTATCAGCAGTGCTGTGCCTGGCATCACATCCGCCTCGTGGTGCGCCACCGAG
GCGAGAAAACCCTCGTCCAGTTCGCCGATCACCTGCTGTCCGTCTGCGGGTGGACGCTTGGCGAGGTGTTCTTTTCGTTC
AATGCGGCGCGCGAAATCTCTTCGCTGGCCGTCGTGTGCGCCAGGCGGTGGCGCGCCATTCCATCCGCGGCCGATCGCGC
CGCGTATCGCAATCAGATCTGCGCTGACACGTCGCCCGAATTCGTGGCGACGTTCGACGTGCTGTGCGAGGCCGACGCCG
GCCCGCAGTGA

Upstream 100 bases:

>100_bases
TCGAAGTCATTGAAGGTGAGTTTCTCAAGGCGTATGTCTCGCTGGCGACATGGCACGCCGAAATCCGGTCGCAGGCCGTC
GCGCCGCAACGTCGGAAAGC

Downstream 100 bases:

>100_bases
GGTATCCCATGGACTATCCAATCGAACCGATCGACGCAATCGAGCGGCGGGGCCGCTCGGCCATGTGCAATGGCCTTGAG
CCCGAGATGTGCCCCTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTQRSLTWSPEPPRFFADMTCCKPARVSVGLACKRPYQQCCAWHHIRLVVRHRGEKTLVQFADHLLSVCGWTLGEVFFSF
NAAREISSLAVVCARRWRAIPSAADRAAYRNQICADTSPEFVATFDVLCEADAGPQ

Sequences:

>Translated_136_residues
MTQRSLTWSPEPPRFFADMTCCKPARVSVGLACKRPYQQCCAWHHIRLVVRHRGEKTLVQFADHLLSVCGWTLGEVFFSF
NAAREISSLAVVCARRWRAIPSAADRAAYRNQICADTSPEFVATFDVLCEADAGPQ
>Mature_135_residues
TQRSLTWSPEPPRFFADMTCCKPARVSVGLACKRPYQQCCAWHHIRLVVRHRGEKTLVQFADHLLSVCGWTLGEVFFSFN
AAREISSLAVVCARRWRAIPSAADRAAYRNQICADTSPEFVATFDVLCEADAGPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15278; Mature: 15146

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRSLTWSPEPPRFFADMTCCKPARVSVGLACKRPYQQCCAWHHIRLVVRHRGEKTLVQ
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH
FADHLLSVCGWTLGEVFFSFNAAREISSLAVVCARRWRAIPSAADRAAYRNQICADTSPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
FVATFDVLCEADAGPQ
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TQRSLTWSPEPPRFFADMTCCKPARVSVGLACKRPYQQCCAWHHIRLVVRHRGEKTLVQ
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH
FADHLLSVCGWTLGEVFFSFNAAREISSLAVVCARRWRAIPSAADRAAYRNQICADTSPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
FVATFDVLCEADAGPQ
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA