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The map label for this gene is yoaB [C]

Identifier: 17546294

GI number: 17546294

Start: 1689401

End: 1689796

Strand: Direct

Name: yoaB [C]

Synonym: RSc1575

Alternate gene names: 17546294

Gene position: 1689401-1689796 (Clockwise)

Preceding gene: 17546292

Following gene: 17546295

Centisome position: 45.46

GC content: 65.4

Gene sequence:

>396_bases
ATGACGACCCGATGGATTCCCCCGATTTTCAAGATGAGCACTGAACTGAAGCGTTACAACGTCGAACATCGCTACTCCGA
CGCGGCGGTCTACAACGGCGTGGTCTATGTCGCCGGCCAGGTGCCGGAAACCACCCTGGACGGCGACATTGCCGCGCAGA
CCGCCGAGGTGCTCGCCACCATCGACCGCGTGCTGGCCGCCAACGGCAGCGACAAGACGCGCATCCTGATGTGCCAGATC
TTCCTGAAGGACATCGCCGAGATCGGTGCGATGAACGCGGTCTGGGACCAGTGGGTCGCGCCGGGCAACGCGCCGCCGCG
CGCCACCGTGGAGGCCGCGCTGGCCAATCCGAAGTACCGCATCGAGATCGTCGTGACGGCGGCGCGCAAGGGCTGA

Upstream 100 bases:

>100_bases
GCCAGCATGTACGCACGGTCGAGATTCCCGACGTGGGCCACGCGCCGACCTTCGTGCAGCCCGACCAGGTCGCGATCGCG
CGCCAATTCTTTCTCGGTCA

Downstream 100 bases:

>100_bases
TCCGCATCCGTTTGCAAGACGCACTATGAACAGCAAGACCGACCGTCCGGCAGAGGGCGCCGGCGCGACGGCCGACAGGG
CGGCGCGCGAGGCGGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTTRWIPPIFKMSTELKRYNVEHRYSDAAVYNGVVYVAGQVPETTLDGDIAAQTAEVLATIDRVLAANGSDKTRILMCQI
FLKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALANPKYRIEIVVTAARKG

Sequences:

>Translated_131_residues
MTTRWIPPIFKMSTELKRYNVEHRYSDAAVYNGVVYVAGQVPETTLDGDIAAQTAEVLATIDRVLAANGSDKTRILMCQI
FLKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALANPKYRIEIVVTAARKG
>Mature_130_residues
TTRWIPPIFKMSTELKRYNVEHRYSDAAVYNGVVYVAGQVPETTLDGDIAAQTAEVLATIDRVLAANGSDKTRILMCQIF
LKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALANPKYRIEIVVTAARKG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=111, Percent_Identity=49.5495495495495, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14363; Mature: 14231

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRWIPPIFKMSTELKRYNVEHRYSDAAVYNGVVYVAGQVPETTLDGDIAAQTAEVLAT
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHH
IDRVLAANGSDKTRILMCQIFLKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALANPKYR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEE
IEIVVTAARKG
EEEEEEECCCC
>Mature Secondary Structure 
TTRWIPPIFKMSTELKRYNVEHRYSDAAVYNGVVYVAGQVPETTLDGDIAAQTAEVLAT
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHH
IDRVLAANGSDKTRILMCQIFLKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALANPKYR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEE
IEIVVTAARKG
EEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA