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The map label for this gene is 17545762

Identifier: 17545762

GI number: 17545762

Start: 1098461

End: 1098877

Strand: Direct

Name: 17545762

Synonym: RSc1043

Alternate gene names: NA

Gene position: 1098461-1098877 (Clockwise)

Preceding gene: 17545761

Following gene: 17545763

Centisome position: 29.56

GC content: 70.98

Gene sequence:

>417_bases
ATGCCTGATTCCGCCGTGCCGACTGAGCCCGTGCGCATCTGTGCCGGCGCCGATCTGCTGGACGGCGGCCTCGGCGTGCG
CTTTCCCGTCGAGGTGCGCGGGCGCCCGATGGGGGCATTCGTGGTGCGCTACGCAGGCGGTGTCCACGGTTATCTGAACC
AGTGCGCCCATGTCCCGATGGAAATGGACTGGCAGGAAGGCCAGTTCTTTGAAAGCTCGGGCCTGTACCTGATGTGCGCG
ACGCACGGCGCGATCTACGAGCCCGATACCGGCCGCTGCGTCGGGGGACCGTGCCGGGGTGCGCATCTGACCAAGCTCGA
CGTCGCCGAGCGCGATGGCGACGTCTGGTGGCGGCCCGACGCGCTGTGCCGCCTGCCCGCCGCGCCCGACCCCGCCCCGG
TACCGCCGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCGGTCTCCTACGGCGCGCATCCGGCCGATGTGCTGCACGCGCTGGACCCGCTGTTCTGTGCCGGATCGGTCACCGAACT
GCATCGCTGGCTGGCCGACC

Downstream 100 bases:

>100_bases
CAACGACTCTCTTCGATTGCATTGTCTTAGTCCATGACCGATCCGACCCCGCCGAAATCGCCGGAAGAAGGCGCCGGCAA
GCCCGATGAACTGGAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Rieske Domain Protein; Rieske Region; Ferredoxin; Rieske; Rieske Protein; Rieske Iron-Sulfur Domain Protein; Nitrite Reductase Ferredoxin Subunit; Rieske 2Fe-2S Family Protein; Ferredoxin Protein; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPDSAVPTEPVRICAGADLLDGGLGVRFPVEVRGRPMGAFVVRYAGGVHGYLNQCAHVPMEMDWQEGQFFESSGLYLMCA
THGAIYEPDTGRCVGGPCRGAHLTKLDVAERDGDVWWRPDALCRLPAAPDPAPVPPAA

Sequences:

>Translated_138_residues
MPDSAVPTEPVRICAGADLLDGGLGVRFPVEVRGRPMGAFVVRYAGGVHGYLNQCAHVPMEMDWQEGQFFESSGLYLMCA
THGAIYEPDTGRCVGGPCRGAHLTKLDVAERDGDVWWRPDALCRLPAAPDPAPVPPAA
>Mature_137_residues
PDSAVPTEPVRICAGADLLDGGLGVRFPVEVRGRPMGAFVVRYAGGVHGYLNQCAHVPMEMDWQEGQFFESSGLYLMCAT
HGAIYEPDTGRCVGGPCRGAHLTKLDVAERDGDVWWRPDALCRLPAAPDPAPVPPAA

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14761; Mature: 14630

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSAVPTEPVRICAGADLLDGGLGVRFPVEVRGRPMGAFVVRYAGGVHGYLNQCAHVPM
CCCCCCCCCCEEEEECCCEECCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCC
EMDWQEGQFFESSGLYLMCATHGAIYEPDTGRCVGGPCRGAHLTKLDVAERDGDVWWRPD
CCCCCCCCEECCCCCEEEEECCCEEECCCCCCEECCCCCCCEEEEEECCCCCCCEEECCC
ALCRLPAAPDPAPVPPAA
CEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PDSAVPTEPVRICAGADLLDGGLGVRFPVEVRGRPMGAFVVRYAGGVHGYLNQCAHVPM
CCCCCCCCCEEEEECCCEECCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCC
EMDWQEGQFFESSGLYLMCATHGAIYEPDTGRCVGGPCRGAHLTKLDVAERDGDVWWRPD
CCCCCCCCEECCCCCEEEEECCCEEECCCCCCEECCCCCCCEEEEEECCCCCCCEEECCC
ALCRLPAAPDPAPVPPAA
CEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA