Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 17545754

GI number: 17545754

Start: 1087851

End: 1089224

Strand: Direct

Name: rmuC [H]

Synonym: RSc1035

Alternate gene names: 17545754

Gene position: 1087851-1089224 (Clockwise)

Preceding gene: 17545753

Following gene: 17545760

Centisome position: 29.27

GC content: 68.78

Gene sequence:

>1374_bases
ATGGCGCCGATGCTGGCGGCGCTGCGCGATGAGCTGGCGCGCGGCAACGAGCGCATCGAGCGCGAGCTGCGCGGCGCGAT
CGGCGAGACCGCGCGCATCGGCCGCAGCGACGTCTCGCAGCAGCTCGGGCAGTTCCAGCAGGTGCTGGCCACGCAACTGA
CCAGCGTCGCCACGGTGCAGAACAACCAGATCGACACCTTCGCCCAGCAGTTGACCAAGCTGACCGAGTCGAACACGCAG
CAACTGGAGGCCGTGCGCCAGAACCTGCAGCAGCAGGCCCTGCAGGCCCGCGAAGAACAGGCCGGCGCGCTGCGCCGCTT
CGGCGAGACCATGCAGCAGCAACTGGCGCAGCTGGCCGACGGCAACGAGCGGCGGCTGGCCGAAGTGCGCGCCACGCTGG
AGCAGAAGCTCAAGGACATCGAGGCCAACAACGCGACCAAGCTCGACGAGATGCGGCGCACCGTCGACGAGAAGCTGCAT
GCCACGCTGGAGCAGCGCCTGGGCGAGTCGTTCAAGCTGGTGTCCGACCGGCTGGAGCAGGTGCATCGCGGCCTGGGCGA
AATGCAGGCGCTGGCGCAGGGCGTCGGCGACCTGAAGAAGGTGCTGACCAACGTGAAGACGCGCGGCACCTGGGGCGAAG
TCCAGCTCGAGATGCTGCTGGAGCAGATGCTGACACCCGAGCAGTACGACAAGAACGTCGAGACCGTGCGCGGCACCGGC
GCGCGGGTCGAGTTCGCCATCCGCCTGCCCGGCAAGACCGATGCGGACCGCGAGGCGACTGTCTGGCTGCCGATCGATGC
CAAGTTCCCCAAGGAACAGTACGAGCGTCTGCTCGATGCGCAGGAGCGCGCGGACGCGGAGGGCGCCGCCGTGGCCAGCC
GCGAGCTGGAGGCGGCCGTGCGCAAGGAAGCGCAGACCATTCACGAGAAGTACATTGCGCCGCCGGCCACCACCGACTTC
GCCATCCTGTTCCTGCCGACCGAGGGTCTCTATGCCGAGGTGCTGCGCCGCCCCGGCCTGACCGACGAGCTGCAGCGCAA
GTTCCGCGTGACGGTGGCCGGGCCGACCACGCTGACGGCCATCCTCAACAGCCTGCAGATGGGCTTCCGCACGCTGGCGC
TGGAGAAGCGCTCCAGCGAGGTCTGGCAGGTGCTGGGCGCGGTCAAGAGCGAGTTCGGCAAGTTCGGCGACGTGCTGGCC
GCGACCAAGAAGACGCTGGAGCGCGCGGTCAGCAACATCGAGCAGGCCGAAGTCCGCACGCGCCAGATGAACCGCAAGCT
CAAGGCGGTGGAAGCCCTGCCGAGCGATTCCGCGCAGACGCTGCTGGGGCTGGAGACGGCGCCGTTGCAGGACGACGCAG
CCGAGGCGGATTGA

Upstream 100 bases:

>100_bases
TATGGACTGGATGGTATTACTGACGTTGCTGGGCGTGGCCGTGGTGGCCGTGCTGTGTGTGTTGATCTGGCGCAGCGTAT
CGCGCCCGGCCGACAGCGAT

Downstream 100 bases:

>100_bases
ACCAAAACGAAAGGGGCGGAAATTTCCGCCCCTTTTTTCGATGTGTGGATCGCGCTGCTGCCGTTCTCAGATTTCGTCCG
GAACGTCGCGCAGGACGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAPMLAALRDELARGNERIERELRGAIGETARIGRSDVSQQLGQFQQVLATQLTSVATVQNNQIDTFAQQLTKLTESNTQ
QLEAVRQNLQQQALQAREEQAGALRRFGETMQQQLAQLADGNERRLAEVRATLEQKLKDIEANNATKLDEMRRTVDEKLH
ATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKTRGTWGEVQLEMLLEQMLTPEQYDKNVETVRGTG
ARVEFAIRLPGKTDADREATVWLPIDAKFPKEQYERLLDAQERADAEGAAVASRELEAAVRKEAQTIHEKYIAPPATTDF
AILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLA
ATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQTLLGLETAPLQDDAAEAD

Sequences:

>Translated_457_residues
MAPMLAALRDELARGNERIERELRGAIGETARIGRSDVSQQLGQFQQVLATQLTSVATVQNNQIDTFAQQLTKLTESNTQ
QLEAVRQNLQQQALQAREEQAGALRRFGETMQQQLAQLADGNERRLAEVRATLEQKLKDIEANNATKLDEMRRTVDEKLH
ATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKTRGTWGEVQLEMLLEQMLTPEQYDKNVETVRGTG
ARVEFAIRLPGKTDADREATVWLPIDAKFPKEQYERLLDAQERADAEGAAVASRELEAAVRKEAQTIHEKYIAPPATTDF
AILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLA
ATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQTLLGLETAPLQDDAAEAD
>Mature_456_residues
APMLAALRDELARGNERIERELRGAIGETARIGRSDVSQQLGQFQQVLATQLTSVATVQNNQIDTFAQQLTKLTESNTQQ
LEAVRQNLQQQALQAREEQAGALRRFGETMQQQLAQLADGNERRLAEVRATLEQKLKDIEANNATKLDEMRRTVDEKLHA
TLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKTRGTWGEVQLEMLLEQMLTPEQYDKNVETVRGTGA
RVEFAIRLPGKTDADREATVWLPIDAKFPKEQYERLLDAQERADAEGAAVASRELEAAVRKEAQTIHEKYIAPPATTDFA
ILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAA
TKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQTLLGLETAPLQDDAAEAD

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 50908; Mature: 50777

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPMLAALRDELARGNERIERELRGAIGETARIGRSDVSQQLGQFQQVLATQLTSVATVQ
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NNQIDTFAQQLTKLTESNTQQLEAVRQNLQQQALQAREEQAGALRRFGETMQQQLAQLAD
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNERRLAEVRATLEQKLKDIEANNATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQ
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
VHRGLGEMQALAQGVGDLKKVLTNVKTRGTWGEVQLEMLLEQMLTPEQYDKNVETVRGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHCCCC
ARVEFAIRLPGKTDADREATVWLPIDAKFPKEQYERLLDAQERADAEGAAVASRELEAAV
CEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RKEAQTIHEKYIAPPATTDFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTA
HHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHEEEECCHHHHHH
ILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQAEVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQMNRKLKAVEALPSDSAQTLLGLETAPLQDDAAEAD
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APMLAALRDELARGNERIERELRGAIGETARIGRSDVSQQLGQFQQVLATQLTSVATVQ
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NNQIDTFAQQLTKLTESNTQQLEAVRQNLQQQALQAREEQAGALRRFGETMQQQLAQLAD
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNERRLAEVRATLEQKLKDIEANNATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQ
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
VHRGLGEMQALAQGVGDLKKVLTNVKTRGTWGEVQLEMLLEQMLTPEQYDKNVETVRGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHCCCC
ARVEFAIRLPGKTDADREATVWLPIDAKFPKEQYERLLDAQERADAEGAAVASRELEAAV
CEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RKEAQTIHEKYIAPPATTDFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTA
HHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHEEEECCHHHHHH
ILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQAEVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQMNRKLKAVEALPSDSAQTLLGLETAPLQDDAAEAD
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]