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The map label for this gene is fdx [H]

Identifier: 17545744

GI number: 17545744

Start: 1077812

End: 1078150

Strand: Direct

Name: fdx [H]

Synonym: RSc1025

Alternate gene names: 17545744

Gene position: 1077812-1078150 (Clockwise)

Preceding gene: 17545743

Following gene: 17545745

Centisome position: 29.0

GC content: 62.83

Gene sequence:

>339_bases
ATGCCACAAATCGTCGTCCTTCCCCACGTCGAATACTGCCCGGAAGGGGCCGTGATCGAAGCCAAGCCGGGTACGAGCAT
CTGCGATGCGCTGCTGGGCGCGCATATCGAGATCGAGCATGCGTGCGAGAAATCGTGCGCCTGCACCACCTGCCACGTGA
TCGTGCGCGAAGGCTTCGACTCGCTGGGCGAAGCGACCGAGAAGGAAGAGGACCTGCTCGACAAGGCCTGGGGCCTGGAG
CCGAACTCGCGCCTGTCGTGCCAGGCCAAGGTCGCCGACGAGGACCTGACCGTCGAGATCCCCAAGTATTCGATCAACCA
CGCCAAGGAAACCCACTGA

Upstream 100 bases:

>100_bases
ATGGACCGCGGCATCCGCGCGGCGCTGGCCGGCAAACGCATCGAGGAGCTCGGCTGATCGGCGGCCGTCTGTCCTCACTC
ACTTATCGAACGGGTTTTTC

Downstream 100 bases:

>100_bases
GCCGCGCCGCTGGCGTAGCGGATCGTGGAGGGAGCCCCAACATGAAATGGAACGATATCCAGCAGATTGCCGAAGCGCTG
TATGACCAGTATCCGGACGT

Product: ferredoxin [2FE-2S] protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPQIVVLPHVEYCPEGAVIEAKPGTSICDALLGAHIEIEHACEKSCACTTCHVIVREGFDSLGEATEKEEDLLDKAWGLE
PNSRLSCQAKVADEDLTVEIPKYSINHAKETH

Sequences:

>Translated_112_residues
MPQIVVLPHVEYCPEGAVIEAKPGTSICDALLGAHIEIEHACEKSCACTTCHVIVREGFDSLGEATEKEEDLLDKAWGLE
PNSRLSCQAKVADEDLTVEIPKYSINHAKETH
>Mature_111_residues
PQIVVLPHVEYCPEGAVIEAKPGTSICDALLGAHIEIEHACEKSCACTTCHVIVREGFDSLGEATEKEEDLLDKAWGLEP
NSRLSCQAKVADEDLTVEIPKYSINHAKETH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=72.7272727272727, Blast_Score=171, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=40.2061855670103, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=86, Percent_Identity=41.8604651162791, Blast_Score=68, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24661503, Length=113, Percent_Identity=38.0530973451327, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12228; Mature: 12097

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIVVLPHVEYCPEGAVIEAKPGTSICDALLGAHIEIEHACEKSCACTTCHVIVREGFD
CCCEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHCHH
SLGEATEKEEDLLDKAWGLEPNSRLSCQAKVADEDLTVEIPKYSINHAKETH
HHCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PQIVVLPHVEYCPEGAVIEAKPGTSICDALLGAHIEIEHACEKSCACTTCHVIVREGFD
CCEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHCHH
SLGEATEKEEDLLDKAWGLEPNSRLSCQAKVADEDLTVEIPKYSINHAKETH
HHCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]