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The map label for this gene is yjbJ [H]

Identifier: 17545696

GI number: 17545696

Start: 1026874

End: 1027731

Strand: Direct

Name: yjbJ [H]

Synonym: RSc0977

Alternate gene names: 17545696

Gene position: 1026874-1027731 (Clockwise)

Preceding gene: 17545695

Following gene: 17545697

Centisome position: 27.63

GC content: 70.4

Gene sequence:

>858_bases
ATGAAGCTGCTCCGACGCGCCGCGCTGCTCTGGATGGCCCTGGCCCTGCTGGCCGGCCAGCCGGCGCGCGCCGACGTCTA
CGGCTACATCGACGAGAACGGCCTGGCGCACTTCGCGGCCGAGCGGCTGGATGACCGCTATGTGCTGTTCATGAAGGGCA
CGGCGGTGGCCGGTGCGTCCGGCATTGCCCAGCCGGCCGGTGACCCGCCGGATGCCGATGCCGATCGGAACGCCGCCGGG
CGCGATGCGCCCGACAACGACGGCATGCGCCGGCGCCTGGCGCGCGCGGTGCTGCAGCATCCCAACGTGCCGAGGGTCGA
GCCGCTGATCCGGCAGGCGGCGCGCAAGCATGGCGTCGACCCGGCGCTGGTGAAGGCGGTGATCGCGGCGGAGTCGGGCT
TCAATCCGCAGGCGGTGTCGCCCAAGGGCGCGATCGGGCTGATGCAGGTCATTCCCGAAACCGGCGAGCGCTATGGCGTG
ACCGGCGACGCGCGCCGCACGCTCGCGCAGAAGCTGGCCGACCCGAGGGTCAACATCGCCACCGGTGTGCGCTACCTGAG
CGATCTGCTGCGGATGTTCTCCGGCGATCTCGAACTGGCGCTGGCCGCCTACAACGCCGGCGAGGGCGCGGTGCAGAAGC
ACGGCAACGACATCCCGCCCTATGCCGAGACGCAGAACTACGTGAAGACGGTGCTGCAGTTCTACCGGTACTACAACCCC
GTCACCGCCGCGCCGGGCCTGATGACGGTCAGCGCCGGCGGTGCCATGGCGACGACGCGCAAGCCCGGGCATTCCGGACA
TTCGGGCCGGCCGAGGCGCATCGAACTGGTGCTGCCGGCCCCTTCACAAGAACATTGA

Upstream 100 bases:

>100_bases
CGTGATGAACATGCTGATGGGCAAGGGCGAGGCCGGCGCGCGCCGCACGTGGCTGGAGGCGCGCGGCAACGAGGTCGAGG
CCGATATCTGACCGATTGCG

Downstream 100 bases:

>100_bases
TCCAGCGGCGCCATCCACACGGTCGCGCGCCGCTTTCGCCTGAGCCCCCATGGAACAACAAGACATCCTCTTCGACCCCC
GCGAGCCGGCCGAAGCGCTC

Product: transglycosylase signal peptide protein

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKLLRRAALLWMALALLAGQPARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAVAGASGIAQPAGDPPDADADRNAAG
RDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVDPALVKAVIAAESGFNPQAVSPKGAIGLMQVIPETGERYGV
TGDARRTLAQKLADPRVNIATGVRYLSDLLRMFSGDLELALAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP
VTAAPGLMTVSAGGAMATTRKPGHSGHSGRPRRIELVLPAPSQEH

Sequences:

>Translated_285_residues
MKLLRRAALLWMALALLAGQPARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAVAGASGIAQPAGDPPDADADRNAAG
RDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVDPALVKAVIAAESGFNPQAVSPKGAIGLMQVIPETGERYGV
TGDARRTLAQKLADPRVNIATGVRYLSDLLRMFSGDLELALAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP
VTAAPGLMTVSAGGAMATTRKPGHSGHSGRPRRIELVLPAPSQEH
>Mature_285_residues
MKLLRRAALLWMALALLAGQPARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAVAGASGIAQPAGDPPDADADRNAAG
RDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVDPALVKAVIAAESGFNPQAVSPKGAIGLMQVIPETGERYGV
TGDARRTLAQKLADPRVNIATGVRYLSDLLRMFSGDLELALAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP
VTAAPGLMTVSAGGAMATTRKPGHSGHSGRPRRIELVLPAPSQEH

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082191, Length=115, Percent_Identity=39.1304347826087, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082441, Length=148, Percent_Identity=33.7837837837838, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786405, Length=141, Percent_Identity=34.7517730496454, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 30532; Mature: 30532

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRRAALLWMALALLAGQPARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAVAGAS
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCC
GIAQPAGDPPDADADRNAAGRDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PALVKAVIAAESGFNPQAVSPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPRVNIA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHH
TGVRYLSDLLRMFSGDLELALAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
VTAAPGLMTVSAGGAMATTRKPGHSGHSGRPRRIELVLPAPSQEH
HHCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKLLRRAALLWMALALLAGQPARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAVAGAS
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCC
GIAQPAGDPPDADADRNAAGRDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PALVKAVIAAESGFNPQAVSPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPRVNIA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHH
TGVRYLSDLLRMFSGDLELALAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
VTAAPGLMTVSAGGAMATTRKPGHSGHSGRPRRIELVLPAPSQEH
HHCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]