| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545691
Identifier: 17545691
GI number: 17545691
Start: 1019971
End: 1020939
Strand: Direct
Name: 17545691
Synonym: RSc0972
Alternate gene names: NA
Gene position: 1019971-1020939 (Clockwise)
Preceding gene: 17545690
Following gene: 17545694
Centisome position: 27.45
GC content: 70.18
Gene sequence:
>969_bases ATGGGTAGTCTGAAAGGGTTTGTGCCGGTCACACCGCCGGTCAAGGGGAAGGGGGCGGAGTCGACCGCCGCGCCGCGCGC GATCGACATGGTGACGCCATGGCCGGTGCGCGACTGGGCACCGGAGGTGGCACCGGACGAGGCGGCCGCGATGCGCACGG CGCTGGAGCGCGGCAACGTGCTGCATTTCCCCACGCTGGCGTTTCCGCTCGATGCGCGCGAGCGGCGCTTTCTCGACGCC CGCTGGTCCGACGGCAAGACCAAGAACATCAACCTGCGGGCCAACGAGGCGAACGTGCGCGGCGCGGTGGGCGACCCGGC CGACCTGCGCGATCTCGCCGCCCTGATCCGCCGCTATGCCGACGCCGCCGAGCAACTGGTGCGGACACTGTTTCCGGCCT ACGTCCCGTACCTTAAGCGGGCCGGCACCTCGCTGCGGCCGGCCGAGATCGCCGGACGGGCGGTGAGCTGGCGCAAGGAC GATACGCGCCTGCATGTCGATGCGTTTCCGTCGAATCCGCTGCAGGGCCAGCGGCTGCTGCGCGTGTTCCACAACGTCGA TCCGGATGCGCCGCGCGTGTGGCGCATCGGCGAGCCGTTCGGCGATTTCGCCCGGCGCTTCGTCCCGCAGACGCACGGCA TGCTGCCCGGCCAGGCGTGGCTGATGCATCGGCTCCACATCACCAAGCGTCCGCGCTCGGAATATGACCACCGCATGCTG CAGCTGCATGACCTGGCCAAGGCGGACGCCGGGTATCAGCGCACCGCCCCGCAGCAGACCTTCGCATTCGCGCCGGGCGC GACCTGGGTGGTGTTCAGCGACCAGGCGCTGCATGCGGCCATGCACGGCCGGGCGATGATGGAGCAGACCTTCTACCTGG ATCCCGCCGCCATTGCCGACCGCACGCATTCGCCCGAGGCCGTGCTGTCGCGCATGCTCGGCAAGCCGATGCTGCCGGGG CAGCGCTGA
Upstream 100 bases:
>100_bases TGTGCCATGCGGCATGTTTCATTGTCTTTCCTGACGATGCGCTTGCATGAGGAACGCACTATGATTCGTGCCAAATCACA GGCAAGCGATCTTTAAGTTC
Downstream 100 bases:
>100_bases CGCGCACGGCCGTCGCGCGCCGCGGCGGCCGATGCGCGGCCGCCGCGGCCCGAGGTCAGTCGGCGACCTTGTCGCTCGGG TACTTGAACGAATCCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MGSLKGFVPVTPPVKGKGAESTAAPRAIDMVTPWPVRDWAPEVAPDEAAAMRTALERGNVLHFPTLAFPLDARERRFLDA RWSDGKTKNINLRANEANVRGAVGDPADLRDLAALIRRYADAAEQLVRTLFPAYVPYLKRAGTSLRPAEIAGRAVSWRKD DTRLHVDAFPSNPLQGQRLLRVFHNVDPDAPRVWRIGEPFGDFARRFVPQTHGMLPGQAWLMHRLHITKRPRSEYDHRML QLHDLAKADAGYQRTAPQQTFAFAPGATWVVFSDQALHAAMHGRAMMEQTFYLDPAAIADRTHSPEAVLSRMLGKPMLPG QR
Sequences:
>Translated_322_residues MGSLKGFVPVTPPVKGKGAESTAAPRAIDMVTPWPVRDWAPEVAPDEAAAMRTALERGNVLHFPTLAFPLDARERRFLDA RWSDGKTKNINLRANEANVRGAVGDPADLRDLAALIRRYADAAEQLVRTLFPAYVPYLKRAGTSLRPAEIAGRAVSWRKD DTRLHVDAFPSNPLQGQRLLRVFHNVDPDAPRVWRIGEPFGDFARRFVPQTHGMLPGQAWLMHRLHITKRPRSEYDHRML QLHDLAKADAGYQRTAPQQTFAFAPGATWVVFSDQALHAAMHGRAMMEQTFYLDPAAIADRTHSPEAVLSRMLGKPMLPG QR >Mature_321_residues GSLKGFVPVTPPVKGKGAESTAAPRAIDMVTPWPVRDWAPEVAPDEAAAMRTALERGNVLHFPTLAFPLDARERRFLDAR WSDGKTKNINLRANEANVRGAVGDPADLRDLAALIRRYADAAEQLVRTLFPAYVPYLKRAGTSLRPAEIAGRAVSWRKDD TRLHVDAFPSNPLQGQRLLRVFHNVDPDAPRVWRIGEPFGDFARRFVPQTHGMLPGQAWLMHRLHITKRPRSEYDHRMLQ LHDLAKADAGYQRTAPQQTFAFAPGATWVVFSDQALHAAMHGRAMMEQTFYLDPAAIADRTHSPEAVLSRMLGKPMLPGQ R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35998; Mature: 35866
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLKGFVPVTPPVKGKGAESTAAPRAIDMVTPWPVRDWAPEVAPDEAAAMRTALERGNV CCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHCCE LHFPTLAFPLDARERRFLDARWSDGKTKNINLRANEANVRGAVGDPADLRDLAALIRRYA EECCCEECCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH DAAEQLVRTLFPAYVPYLKRAGTSLRPAEIAGRAVSWRKDDTRLHVDAFPSNPLQGQRLL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHH RVFHNVDPDAPRVWRIGEPFGDFARRFVPQTHGMLPGQAWLMHRLHITKRPRSEYDHRML HHHHCCCCCCCCEEECCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH QLHDLAKADAGYQRTAPQQTFAFAPGATWVVFSDQALHAAMHGRAMMEQTFYLDPAAIAD HHHHHHHHCCCCCCCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHC RTHSPEAVLSRMLGKPMLPGQR CCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GSLKGFVPVTPPVKGKGAESTAAPRAIDMVTPWPVRDWAPEVAPDEAAAMRTALERGNV CCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHCCE LHFPTLAFPLDARERRFLDARWSDGKTKNINLRANEANVRGAVGDPADLRDLAALIRRYA EECCCEECCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH DAAEQLVRTLFPAYVPYLKRAGTSLRPAEIAGRAVSWRKDDTRLHVDAFPSNPLQGQRLL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHH RVFHNVDPDAPRVWRIGEPFGDFARRFVPQTHGMLPGQAWLMHRLHITKRPRSEYDHRML HHHHCCCCCCCCEEECCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH QLHDLAKADAGYQRTAPQQTFAFAPGATWVVFSDQALHAAMHGRAMMEQTFYLDPAAIAD HHHHHHHHCCCCCCCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHC RTHSPEAVLSRMLGKPMLPGQR CCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA