Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17545686

Identifier: 17545686

GI number: 17545686

Start: 1013903

End: 1016704

Strand: Direct

Name: 17545686

Synonym: RSc0967

Alternate gene names: NA

Gene position: 1013903-1016704 (Clockwise)

Preceding gene: 17545685

Following gene: 17545690

Centisome position: 27.28

GC content: 65.74

Gene sequence:

>2802_bases
ATGCACACGCAACACAGCCCCGCCTTGCGCACGTGGTTCGACCAGCTCAAGCGCGACATTGACCTGCATGACCTGGCTGA
ACGGCTCGACCTGCGCCGTAGTGGCGCAAAGGGCAACTACCACAGCCCGCACCACACCGACCGTAGCGCCTCGCTGTCGA
TCTTCGAGCGCGGCCGCGCCTGGAAAGATTGGTCGACCGAGGCGGGCGGTTCCTGCATTGATCTTGTGCAGCACTGCATG
CCCGATGTAGCGACGCCGATGGAGGCCGCAAAGCTGCTGGGCCAGTGGTACGGCATCCCCATGCCGGCCGCACCGGCAAG
CGCCTTGCTCGCCCGCAAGAGCACCGAGGAATACATCGCCGAGCGTGCCCAGGCCAACCCGGAACCGGCCGTCGCCTATC
TCGCCGGCCGTGGCGTCGATGAAGCCGTCAGCCGCCGTGCCATTCAGACCGGCGCGCTTGGCTGGAACGCCTGGAACAGT
CCCAAGGTGCCGGCCGGCGAGGCGGGCCACGGCGGGCCGGCGGCGGCCTTCATCGTGCGCGCCATGGATACGGCGCGCGT
GGTGGCGGTCGACCTGCGCTATGCCGATCCGGCGATCAACGGCAACGTCAAGACGCAATGCCAAGGCGACAAGCTCGGTC
ACGGCTGGACGAGCGATGCGCGCCGCTTGCGGCACGCGCATACCGTCTACATCGTGGAAAGCCCCATCAACGCCCTGTCG
GTCGAGTGTTGCCACTTGCCCGAAGGCACCGCAGCATTTGCCCTTCGCGGCACCGCCAATGTGGACAAGATCGACTGGAC
GTTCCTGCGCGGCAAGCGTGTGGTGATCGCGCTTGACCACACGGACCCTGTGAACGAGCGCACCGGCATGCGTCCGGGCC
TTGCTGCCGCCTGGAAGCTGTCCGAAGCGCTGACCGCCGCCGACATTGGCGCGATGCTGGTGGACATGCAGGATTGGGAG
GAAGGCGAAGATATCAACGACGTTCTGCAAGCCCACGGCGCGGCTGAATTGACCGCCCGCATGCGGCGCCTGGAAGCGTG
GTTGATTCCCGGCATGCCGGGCGGCGGCGAGCGCTTGAGCGGCACCCGCCGCGTCTTCCTGCCGCCCCATGACTTCGGCA
TCTATTGGCGCTTCCGCGTCAAAGAGGACTTCACCCAATACGTGGAGAAGTTCAAGGATGCGGACGACGAGGACGGGCAG
ACCAGCCGCAGCGAGGAGTTAGGCGACCTGTGCGCCTTCCGCGTCGCGGGGCTGTCGCGCCTGCGCGTCCAAAGCCATCT
GGCCACCATCAACGGCACGGCCGACAGCCAGCCCGAAACCGTGTTCGGGATCAGCGCCCAGGTGGCCCGCCACGGGGCGA
CGCTGCAACGCGAAGTGGTCGGCAATGACAAGCTCTATAACCTTGAGTGGTGGCGCGGTAAGTTCGGCCATATCTGGATG
CCGTCGCAGTTTGCCCGCATGGTCAACGTGCTGGAGCGCGCCGCCGACCTGGGCGCGCGCGATGTGGTCAACTTCGTCGG
CTTGGCGTGGCGTGGCGGCGAACTGGCGGCGCTGGAAGGCAGCGACTGCTACTTTGTGGAGCCGCAGAAACAGTGCCTGT
ACTACAACATGCGTTTCCCGCGCAGCACTGCGCAGAGCGCCCGCGCCGTGATCGACGCCTATCAGGCCACGTTCAAGGGC
AACGCCGCCGCTATCGCCCTGGTATGGGCTTTGGGCACGCACCTGAAAACGGTCCTGGGCTTCTATCCGCATTTGCAGAT
GCAGGCAGAGAAAGGGGCGGGCAAGTCCAAGCTGCTGGAAAGCCTCCAAGCGACGGCATCCTTCCAAGTGCTGTCGGGCC
AGATGCTGAAGACTGACCACCGCCGCCGCGCATCGGTGTCGTGGACTTCGCACCCTGTGGGATGGGACGAGTTCTCCAAG
CTGCCCAAGGCCGTGCTGTCCGAGATCGACGGGCTACTGCAATCGACCTACCGCTTCGAGTTCACCCGCGTCGGCGCGGC
GCTCACCCCCTACCTGATGTGCGCGCCGGTCCTGCTGGCCGGCGAGGAAGTAGACGTCGAAAGCCTGCAATCGAAAATCT
GCCGCACGTCGCTGTCGGTCGATAAGCAGGGAGCCATCCTCCCGCGCAACCTGCCGCAGTTCCCCGTGTGGGCGTGGTTG
CAGTTTCTCGCGAGCCAGCAACCGGAGCGCATCCGCGATCTGCATGCGGCGTTTGTGGACGTGAGCCTGAGCCGCAGCCG
CGCCGAGACGAACGACGCCACGGCCCGCCGCATGGTGGAGAACTACGCCGCCATCATGACGGCCTGGGCGCTGCTGGCCG
AGTTCGCGCAGATCGACGTAGAGCAAGGCGGCTTCATCGACCACCTGTTGGTCGAGATGAACGCGCACATCGCGGAGACG
GACGGCACGCGCCTGCCCTGGGTGTGGATCATGGAAATCCTGTTGTCCGAGCTGGATGCCGGCCGCTTCGAGCATCCGCA
CTGTTGGGACACGATTCAGACCGACAGCGGGCGCGAGATGGCGCTGTTCCTGCGGCCCAGTCACGTGATGGACCACCTCT
CCACGGCGATGCACCTGCGCGGCAAGTTCGACGCGCTGCCGATCAAGACGGCCCGCGTGTTCAAGCAGCAGCTATTGCAG
TCGGGCGTGGTGCCGCAGCACGGCGGCAAGCGGTTGGAAGACGTGGAAAAACGTATCCTGGGCCGGCGCTGCGCGCATAT
GGCGGCTATCAGCCTGCCCAGGCTCGAACAGCGCGGCCTGTATGCCTCGCCAGCGCTGGCTGCCTATCAGATGGCGTCAT
AG

Upstream 100 bases:

>100_bases
GCCCCCGGCTACCGCAGCCTGCATTGCCTGCTGGTGCTGGTGAAGCAACAGCTAGACGGCGCCATCGGCACCGTGACCGA
AATGCTTTGAAGGGGGGCAC

Downstream 100 bases:

>100_bases
CCGACGCTAGGCGCACGGCGCCCCTTTCTCTGCCCGGCCAAGGCCCCCGCAATACGCGGGGGCCTTGTGCATTTTGGAGC
GGCGCGACGAGTGGCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 933; Mature: 933

Protein sequence:

>933_residues
MHTQHSPALRTWFDQLKRDIDLHDLAERLDLRRSGAKGNYHSPHHTDRSASLSIFERGRAWKDWSTEAGGSCIDLVQHCM
PDVATPMEAAKLLGQWYGIPMPAAPASALLARKSTEEYIAERAQANPEPAVAYLAGRGVDEAVSRRAIQTGALGWNAWNS
PKVPAGEAGHGGPAAAFIVRAMDTARVVAVDLRYADPAINGNVKTQCQGDKLGHGWTSDARRLRHAHTVYIVESPINALS
VECCHLPEGTAAFALRGTANVDKIDWTFLRGKRVVIALDHTDPVNERTGMRPGLAAAWKLSEALTAADIGAMLVDMQDWE
EGEDINDVLQAHGAAELTARMRRLEAWLIPGMPGGGERLSGTRRVFLPPHDFGIYWRFRVKEDFTQYVEKFKDADDEDGQ
TSRSEELGDLCAFRVAGLSRLRVQSHLATINGTADSQPETVFGISAQVARHGATLQREVVGNDKLYNLEWWRGKFGHIWM
PSQFARMVNVLERAADLGARDVVNFVGLAWRGGELAALEGSDCYFVEPQKQCLYYNMRFPRSTAQSARAVIDAYQATFKG
NAAAIALVWALGTHLKTVLGFYPHLQMQAEKGAGKSKLLESLQATASFQVLSGQMLKTDHRRRASVSWTSHPVGWDEFSK
LPKAVLSEIDGLLQSTYRFEFTRVGAALTPYLMCAPVLLAGEEVDVESLQSKICRTSLSVDKQGAILPRNLPQFPVWAWL
QFLASQQPERIRDLHAAFVDVSLSRSRAETNDATARRMVENYAAIMTAWALLAEFAQIDVEQGGFIDHLLVEMNAHIAET
DGTRLPWVWIMEILLSELDAGRFEHPHCWDTIQTDSGREMALFLRPSHVMDHLSTAMHLRGKFDALPIKTARVFKQQLLQ
SGVVPQHGGKRLEDVEKRILGRRCAHMAAISLPRLEQRGLYASPALAAYQMAS

Sequences:

>Translated_933_residues
MHTQHSPALRTWFDQLKRDIDLHDLAERLDLRRSGAKGNYHSPHHTDRSASLSIFERGRAWKDWSTEAGGSCIDLVQHCM
PDVATPMEAAKLLGQWYGIPMPAAPASALLARKSTEEYIAERAQANPEPAVAYLAGRGVDEAVSRRAIQTGALGWNAWNS
PKVPAGEAGHGGPAAAFIVRAMDTARVVAVDLRYADPAINGNVKTQCQGDKLGHGWTSDARRLRHAHTVYIVESPINALS
VECCHLPEGTAAFALRGTANVDKIDWTFLRGKRVVIALDHTDPVNERTGMRPGLAAAWKLSEALTAADIGAMLVDMQDWE
EGEDINDVLQAHGAAELTARMRRLEAWLIPGMPGGGERLSGTRRVFLPPHDFGIYWRFRVKEDFTQYVEKFKDADDEDGQ
TSRSEELGDLCAFRVAGLSRLRVQSHLATINGTADSQPETVFGISAQVARHGATLQREVVGNDKLYNLEWWRGKFGHIWM
PSQFARMVNVLERAADLGARDVVNFVGLAWRGGELAALEGSDCYFVEPQKQCLYYNMRFPRSTAQSARAVIDAYQATFKG
NAAAIALVWALGTHLKTVLGFYPHLQMQAEKGAGKSKLLESLQATASFQVLSGQMLKTDHRRRASVSWTSHPVGWDEFSK
LPKAVLSEIDGLLQSTYRFEFTRVGAALTPYLMCAPVLLAGEEVDVESLQSKICRTSLSVDKQGAILPRNLPQFPVWAWL
QFLASQQPERIRDLHAAFVDVSLSRSRAETNDATARRMVENYAAIMTAWALLAEFAQIDVEQGGFIDHLLVEMNAHIAET
DGTRLPWVWIMEILLSELDAGRFEHPHCWDTIQTDSGREMALFLRPSHVMDHLSTAMHLRGKFDALPIKTARVFKQQLLQ
SGVVPQHGGKRLEDVEKRILGRRCAHMAAISLPRLEQRGLYASPALAAYQMAS
>Mature_933_residues
MHTQHSPALRTWFDQLKRDIDLHDLAERLDLRRSGAKGNYHSPHHTDRSASLSIFERGRAWKDWSTEAGGSCIDLVQHCM
PDVATPMEAAKLLGQWYGIPMPAAPASALLARKSTEEYIAERAQANPEPAVAYLAGRGVDEAVSRRAIQTGALGWNAWNS
PKVPAGEAGHGGPAAAFIVRAMDTARVVAVDLRYADPAINGNVKTQCQGDKLGHGWTSDARRLRHAHTVYIVESPINALS
VECCHLPEGTAAFALRGTANVDKIDWTFLRGKRVVIALDHTDPVNERTGMRPGLAAAWKLSEALTAADIGAMLVDMQDWE
EGEDINDVLQAHGAAELTARMRRLEAWLIPGMPGGGERLSGTRRVFLPPHDFGIYWRFRVKEDFTQYVEKFKDADDEDGQ
TSRSEELGDLCAFRVAGLSRLRVQSHLATINGTADSQPETVFGISAQVARHGATLQREVVGNDKLYNLEWWRGKFGHIWM
PSQFARMVNVLERAADLGARDVVNFVGLAWRGGELAALEGSDCYFVEPQKQCLYYNMRFPRSTAQSARAVIDAYQATFKG
NAAAIALVWALGTHLKTVLGFYPHLQMQAEKGAGKSKLLESLQATASFQVLSGQMLKTDHRRRASVSWTSHPVGWDEFSK
LPKAVLSEIDGLLQSTYRFEFTRVGAALTPYLMCAPVLLAGEEVDVESLQSKICRTSLSVDKQGAILPRNLPQFPVWAWL
QFLASQQPERIRDLHAAFVDVSLSRSRAETNDATARRMVENYAAIMTAWALLAEFAQIDVEQGGFIDHLLVEMNAHIAET
DGTRLPWVWIMEILLSELDAGRFEHPHCWDTIQTDSGREMALFLRPSHVMDHLSTAMHLRGKFDALPIKTARVFKQQLLQ
SGVVPQHGGKRLEDVEKRILGRRCAHMAAISLPRLEQRGLYASPALAAYQMAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103479; Mature: 103479

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTQHSPALRTWFDQLKRDIDLHDLAERLDLRRSGAKGNYHSPHHTDRSASLSIFERGRA
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC
WKDWSTEAGGSCIDLVQHCMPDVATPMEAAKLLGQWYGIPMPAAPASALLARKSTEEYIA
CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHH
ERAQANPEPAVAYLAGRGVDEAVSRRAIQTGALGWNAWNSPKVPAGEAGHGGPAAAFIVR
HHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AMDTARVVAVDLRYADPAINGNVKTQCQGDKLGHGWTSDARRLRHAHTVYIVESPINALS
HHCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCCCEE
VECCHLPEGTAAFALRGTANVDKIDWTFLRGKRVVIALDHTDPVNERTGMRPGLAAAWKL
EEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCHHCCCCCCHHHHHHH
SEALTAADIGAMLVDMQDWEEGEDINDVLQAHGAAELTARMRRLEAWLIPGMPGGGERLS
HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GTRRVFLPPHDFGIYWRFRVKEDFTQYVEKFKDADDEDGQTSRSEELGDLCAFRVAGLSR
CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LRVQSHLATINGTADSQPETVFGISAQVARHGATLQREVVGNDKLYNLEWWRGKFGHIWM
HHHHHHHHEECCCCCCCCCEEEEHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCEEC
PSQFARMVNVLERAADLGARDVVNFVGLAWRGGELAALEGSDCYFVEPQKQCLYYNMRFP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCEEEEECCCCEEEECCCCCEEEEEECCC
RSTAQSARAVIDAYQATFKGNAAAIALVWALGTHLKTVLGFYPHLQMQAEKGAGKSKLLE
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
SLQATASFQVLSGQMLKTDHRRRASVSWTSHPVGWDEFSKLPKAVLSEIDGLLQSTYRFE
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FTRVGAALTPYLMCAPVLLAGEEVDVESLQSKICRTSLSVDKQGAILPRNLPQFPVWAWL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
QFLASQQPERIRDLHAAFVDVSLSRSRAETNDATARRMVENYAAIMTAWALLAEFAQIDV
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EQGGFIDHLLVEMNAHIAETDGTRLPWVWIMEILLSELDAGRFEHPHCWDTIQTDSGREM
CCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE
ALFLRPSHVMDHLSTAMHLRGKFDALPIKTARVFKQQLLQSGVVPQHGGKRLEDVEKRIL
EEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GRRCAHMAAISLPRLEQRGLYASPALAAYQMAS
HHHHHHHHHHCCCCHHHCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MHTQHSPALRTWFDQLKRDIDLHDLAERLDLRRSGAKGNYHSPHHTDRSASLSIFERGRA
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC
WKDWSTEAGGSCIDLVQHCMPDVATPMEAAKLLGQWYGIPMPAAPASALLARKSTEEYIA
CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHH
ERAQANPEPAVAYLAGRGVDEAVSRRAIQTGALGWNAWNSPKVPAGEAGHGGPAAAFIVR
HHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AMDTARVVAVDLRYADPAINGNVKTQCQGDKLGHGWTSDARRLRHAHTVYIVESPINALS
HHCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCCCEE
VECCHLPEGTAAFALRGTANVDKIDWTFLRGKRVVIALDHTDPVNERTGMRPGLAAAWKL
EEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCHHCCCCCCHHHHHHH
SEALTAADIGAMLVDMQDWEEGEDINDVLQAHGAAELTARMRRLEAWLIPGMPGGGERLS
HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GTRRVFLPPHDFGIYWRFRVKEDFTQYVEKFKDADDEDGQTSRSEELGDLCAFRVAGLSR
CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LRVQSHLATINGTADSQPETVFGISAQVARHGATLQREVVGNDKLYNLEWWRGKFGHIWM
HHHHHHHHEECCCCCCCCCEEEEHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCEEC
PSQFARMVNVLERAADLGARDVVNFVGLAWRGGELAALEGSDCYFVEPQKQCLYYNMRFP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCEEEEECCCCEEEECCCCCEEEEEECCC
RSTAQSARAVIDAYQATFKGNAAAIALVWALGTHLKTVLGFYPHLQMQAEKGAGKSKLLE
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
SLQATASFQVLSGQMLKTDHRRRASVSWTSHPVGWDEFSKLPKAVLSEIDGLLQSTYRFE
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FTRVGAALTPYLMCAPVLLAGEEVDVESLQSKICRTSLSVDKQGAILPRNLPQFPVWAWL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
QFLASQQPERIRDLHAAFVDVSLSRSRAETNDATARRMVENYAAIMTAWALLAEFAQIDV
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EQGGFIDHLLVEMNAHIAETDGTRLPWVWIMEILLSELDAGRFEHPHCWDTIQTDSGREM
CCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE
ALFLRPSHVMDHLSTAMHLRGKFDALPIKTARVFKQQLLQSGVVPQHGGKRLEDVEKRIL
EEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GRRCAHMAAISLPRLEQRGLYASPALAAYQMAS
HHHHHHHHHHCCCCHHHCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA