| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545685
Identifier: 17545685
GI number: 17545685
Start: 1013569
End: 1013892
Strand: Direct
Name: 17545685
Synonym: RSc0966
Alternate gene names: NA
Gene position: 1013569-1013892 (Clockwise)
Preceding gene: 17545684
Following gene: 17545686
Centisome position: 27.27
GC content: 65.12
Gene sequence:
>324_bases ATGGGTAAGCGCAACCACCCGCCGCATTGGATGGCCCTGGAAGCGCAACGCTCGCTCACTGCACAGCTTGCACAGCAAGC CCCCGCCCAAACGCCGTTTGCCGCAACGCTGGCGCGATTGGAGACCGTGAGCGCATCCATGCGCGACGCTACCGAAGAGG CCGGCGCGCAATTGCTGTGCGTAAGCGCGGCGCTCGACGGCATCCTTTGCTTGCTCGACCTGCACGCGCAGACCGCCCCC GGCTACCGCAGCCTGCATTGCCTGCTGGTGCTGGTGAAGCAACAGCTAGACGGCGCCATCGGCACCGTGACCGAAATGCT TTGA
Upstream 100 bases:
>100_bases TTGCGCGATGCCGTCGCCGCACCGACAGACCGCGCCTCGCTCGATGTGGCAGGCGCCGCGCTGCTGGCCGTCGCCGCCAT CGCTCAAGCGAGGCGGCGCC
Downstream 100 bases:
>100_bases AGGGGGGCACATGCACACGCAACACAGCCCCGCCTTGCGCACGTGGTTCGACCAGCTCAAGCGCGACATTGACCTGCATG ACCTGGCTGAACGGCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGKRNHPPHWMALEAQRSLTAQLAQQAPAQTPFAATLARLETVSASMRDATEEAGAQLLCVSAALDGILCLLDLHAQTAP GYRSLHCLLVLVKQQLDGAIGTVTEML
Sequences:
>Translated_107_residues MGKRNHPPHWMALEAQRSLTAQLAQQAPAQTPFAATLARLETVSASMRDATEEAGAQLLCVSAALDGILCLLDLHAQTAP GYRSLHCLLVLVKQQLDGAIGTVTEML >Mature_106_residues GKRNHPPHWMALEAQRSLTAQLAQQAPAQTPFAATLARLETVSASMRDATEEAGAQLLCVSAALDGILCLLDLHAQTAPG YRSLHCLLVLVKQQLDGAIGTVTEML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11418; Mature: 11287
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRNHPPHWMALEAQRSLTAQLAQQAPAQTPFAATLARLETVSASMRDATEEAGAQLLC CCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEH VSAALDGILCLLDLHAQTAPGYRSLHCLLVLVKQQLDGAIGTVTEML HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure GKRNHPPHWMALEAQRSLTAQLAQQAPAQTPFAATLARLETVSASMRDATEEAGAQLLC CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEH VSAALDGILCLLDLHAQTAPGYRSLHCLLVLVKQQLDGAIGTVTEML HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA