Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is 17545678

Identifier: 17545678

GI number: 17545678

Start: 1007530

End: 1008369

Strand: Direct

Name: 17545678

Synonym: RSc0959

Alternate gene names: NA

Gene position: 1007530-1008369 (Clockwise)

Preceding gene: 17545677

Following gene: 17545679

Centisome position: 27.11

GC content: 59.17

Gene sequence:

>840_bases
ATGGGCATCTATTCAGAACCACTCAAGGAGGTATCGTTGGAACACAAGAATCGCCCCTTTTTTCGGCGGCAAGGTGTCGG
CATGCGCAGCGCGTTGCTGGCGGGCGCCATCTCCGCGCTGCTGTCCTTGGCTGGTTGCGCTTCCTCACCCGCTGACCGAG
CAGCCGCGTCGGTCGGCTTCGGCGACACGATCAGCGAGAAGACGCTGAACAACATGGCGCGGCCGCCCAAGCAGGTCGTG
TATCGCTTTGACGACCACCGCTACATCGAAAACGATCCGGGGCCGGGATACAACCTGCCGTGTCAGGCGGAGTTGTTTTA
CGTGGATGAGGCGCTTGGCATTCGCACGCAGTTCGGCGGCAACGGCAAGCGCAATCCGACAGGGCTGTTCAAGGTGGTCA
ACTCGCCTTATGTCGTCGCTCGCGATGACGCCGCCGTCCATGTTTCCTTCGACCAAGGGCGGACGTTCAAATCACTCCGT
CCGCAGGTTAGTGGTAGCGGCGACGTTGTTGTTGTCGGGAACGACATCTATGCAGGAGGCGGAAGTGAAGGCGATCCAAT
CGGGGCATTTAGCAAATGGGCAGGAGCGAGGTGGTTCGTCATTGATCCCATCAAGCAGGAAATCACGCTGAAGTATCGAG
AGGTGTCCCGCGAACCCGAAGGCGACCGCATTCGCAAGCTCGCACGCGAGCACGTAGTCAATAACAAGTATCCAGACCCG
ACCCAGTATTTCACCTGTAGAGAGGACTTGCACTGGCGTCCATCGATTAACCGCGAGCACCAGTTGCAAAAGGCGCAGCA
GCAGAACCCATCCACCGCTGACCGGAGCGCCAACCCGTGA

Upstream 100 bases:

>100_bases
AGGACGAAACGCGCACGGTTATTGAGGGCGGGAAGGTTGCTCCCGACGCATCGCTCGACCACCACATCATTCGGCGCTGG
CGCCCTCGGCGAGGTTAAAC

Downstream 100 bases:

>100_bases
AAGCCCCCAAGTTCAAGCACTTTGAACCCAAGGTCGAATCGTTGAAGGAGGTACCGCTGAGGTACGAATCGACCCCGCTC
GTACTTGAGCTTGGCCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGFGDTISEKTLNNMARPPKQVV
YRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGGNGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLR
PQVSGSGDVVVVGNDIYAGGGSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP
TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP

Sequences:

>Translated_279_residues
MGIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGFGDTISEKTLNNMARPPKQVV
YRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGGNGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLR
PQVSGSGDVVVVGNDIYAGGGSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP
TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP
>Mature_278_residues
GIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGFGDTISEKTLNNMARPPKQVVY
RFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGGNGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLRP
QVSGSGDVVVVGNDIYAGGGSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDPT
QYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30908; Mature: 30777

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGF
CCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
GDTISEKTLNNMARPPKQVVYRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGG
CCCHHHHHHHHHCCCHHHHHEECCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCEEECCC
NGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLRPQVSGSGDVVVVGNDIYAGG
CCCCCCCHHEEECCCCEEEEECCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCEEEECC
GSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP
CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP
CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGF
CCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
GDTISEKTLNNMARPPKQVVYRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGG
CCCHHHHHHHHHCCCHHHHHEECCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCEEECCC
NGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLRPQVSGSGDVVVVGNDIYAGG
CCCCCCCHHEEECCCCEEEEECCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCEEEECC
GSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP
CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP
CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA