| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545678
Identifier: 17545678
GI number: 17545678
Start: 1007530
End: 1008369
Strand: Direct
Name: 17545678
Synonym: RSc0959
Alternate gene names: NA
Gene position: 1007530-1008369 (Clockwise)
Preceding gene: 17545677
Following gene: 17545679
Centisome position: 27.11
GC content: 59.17
Gene sequence:
>840_bases ATGGGCATCTATTCAGAACCACTCAAGGAGGTATCGTTGGAACACAAGAATCGCCCCTTTTTTCGGCGGCAAGGTGTCGG CATGCGCAGCGCGTTGCTGGCGGGCGCCATCTCCGCGCTGCTGTCCTTGGCTGGTTGCGCTTCCTCACCCGCTGACCGAG CAGCCGCGTCGGTCGGCTTCGGCGACACGATCAGCGAGAAGACGCTGAACAACATGGCGCGGCCGCCCAAGCAGGTCGTG TATCGCTTTGACGACCACCGCTACATCGAAAACGATCCGGGGCCGGGATACAACCTGCCGTGTCAGGCGGAGTTGTTTTA CGTGGATGAGGCGCTTGGCATTCGCACGCAGTTCGGCGGCAACGGCAAGCGCAATCCGACAGGGCTGTTCAAGGTGGTCA ACTCGCCTTATGTCGTCGCTCGCGATGACGCCGCCGTCCATGTTTCCTTCGACCAAGGGCGGACGTTCAAATCACTCCGT CCGCAGGTTAGTGGTAGCGGCGACGTTGTTGTTGTCGGGAACGACATCTATGCAGGAGGCGGAAGTGAAGGCGATCCAAT CGGGGCATTTAGCAAATGGGCAGGAGCGAGGTGGTTCGTCATTGATCCCATCAAGCAGGAAATCACGCTGAAGTATCGAG AGGTGTCCCGCGAACCCGAAGGCGACCGCATTCGCAAGCTCGCACGCGAGCACGTAGTCAATAACAAGTATCCAGACCCG ACCCAGTATTTCACCTGTAGAGAGGACTTGCACTGGCGTCCATCGATTAACCGCGAGCACCAGTTGCAAAAGGCGCAGCA GCAGAACCCATCCACCGCTGACCGGAGCGCCAACCCGTGA
Upstream 100 bases:
>100_bases AGGACGAAACGCGCACGGTTATTGAGGGCGGGAAGGTTGCTCCCGACGCATCGCTCGACCACCACATCATTCGGCGCTGG CGCCCTCGGCGAGGTTAAAC
Downstream 100 bases:
>100_bases AAGCCCCCAAGTTCAAGCACTTTGAACCCAAGGTCGAATCGTTGAAGGAGGTACCGCTGAGGTACGAATCGACCCCGCTC GTACTTGAGCTTGGCCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MGIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGFGDTISEKTLNNMARPPKQVV YRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGGNGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLR PQVSGSGDVVVVGNDIYAGGGSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP
Sequences:
>Translated_279_residues MGIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGFGDTISEKTLNNMARPPKQVV YRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGGNGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLR PQVSGSGDVVVVGNDIYAGGGSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP >Mature_278_residues GIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGFGDTISEKTLNNMARPPKQVVY RFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGGNGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLRP QVSGSGDVVVVGNDIYAGGGSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDPT QYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30908; Mature: 30777
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGF CCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC GDTISEKTLNNMARPPKQVVYRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGG CCCHHHHHHHHHCCCHHHHHEECCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCEEECCC NGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLRPQVSGSGDVVVVGNDIYAGG CCCCCCCHHEEECCCCEEEEECCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCEEEECC GSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GIYSEPLKEVSLEHKNRPFFRRQGVGMRSALLAGAISALLSLAGCASSPADRAAASVGF CCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC GDTISEKTLNNMARPPKQVVYRFDDHRYIENDPGPGYNLPCQAELFYVDEALGIRTQFGG CCCHHHHHHHHHCCCHHHHHEECCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCEEECCC NGKRNPTGLFKVVNSPYVVARDDAAVHVSFDQGRTFKSLRPQVSGSGDVVVVGNDIYAGG CCCCCCCHHEEECCCCEEEEECCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCEEEECC GSEGDPIGAFSKWAGARWFVIDPIKQEITLKYREVSREPEGDRIRKLAREHVVNNKYPDP CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC TQYFTCREDLHWRPSINREHQLQKAQQQNPSTADRSANP CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA