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The map label for this gene is 17545677

Identifier: 17545677

GI number: 17545677

Start: 1004804

End: 1007527

Strand: Direct

Name: 17545677

Synonym: RSc0958

Alternate gene names: NA

Gene position: 1004804-1007527 (Clockwise)

Preceding gene: 17545676

Following gene: 17545678

Centisome position: 27.04

GC content: 65.31

Gene sequence:

>2724_bases
ATGCAGCCGCGCCCGCTTTGGCCGTGGCTGTTTTCGCTTGTCGCCAACATTCCGAGAAGTGAGAGCATGGCCGAATCCGA
TCGAACGGCACATCTGCACGGCATCCTCTTTTTCCAACAGAGCAACCGCCTGTTGGGCCTGTCGTTCCCGAAGGACGACA
CTCCCACGGCCACTGACCCACGGGGTCGCTCGTTCCCCGTGCAGATGGTGGTCGAACGCCTGGAAGCCCAGGAGGGCCTG
GGCGAAGACTTCCGTTTCGAGTTGACGCTATTGGCCGATCACGCCGGCCTTGTGCTGGCGGACATGCTGGGCAAGCTGCT
GGCGGTGTCCCTGGTCAAGCCGGACGGCACCCTGCGCTGGTTCACCGGGCACGTGTCGGAATTTTCATTGGTGGGCAGCG
ACCCCGGTGTGGCGACCTACCGGGCGGTGCTCAGGCCGTGGCTGTGGTTTGCGCTACACCGGATCAACAACCGCGTGTTT
CGAGACCGGAGCCTGTACGAGCAAATCGCGGAAATCCTGCAAGACTATGGCGCCTGGGCGCAATGGCGCTGGGACGCGAG
CGGAGCTGATGCGCCGTTCACCATGGCCGTGCAGGGCGGCGGCCAGGGCGAGAGCGACCACAACTACATCCACCGCAGGC
TGGAAGCGCAGGGCTGGACCTACCGCTACGAACACGACGCGACCGGCCACCGGCTGGTCATCTTCGACAGCAACAGCCAG
TGTCCGCGCGTGGCGGGCGACCATCGGATACCCTTTCAGGCTGCGGGCGGCCCCCAGGAGGAAAACGCCATTCAGCGCTG
GACGCCGGTGCAGACCGCTGCGGCCGCGCTATTCGCGGCGAGCGCGTTCGACTTCAAGCAGTCGCAGGCACGGCACCAAG
CAGAATCGACGCTGCGCAAGCAGGGCCGTGTTCCGGAGCTGGAGGCGCACGAATACGTGGGGCACTACGGCTTCACGAAG
GAAGACCCCACGGGCGCTGCGCTGCTGAACTTGCGCAGAGAGGAAGTCGAAGCGCACGCCGAACAATATCAAGCGGAAGG
CAACAACAGCAGCGTGGCGGCCGGCTGCTGGTTCGAATTGTCGGAGCACTTCAGCAACACCGAGCGCGAGGAGGACAGCC
AATACCTGATCGTGGCGGCCAGCCACAGCGCGAGCAACAACTACCTTGCGGAACTCGGGCGACAGGGGGGCCGTGAGGCG
CAGCCGCTTGCCGGCCGCAAGGGCGAATACCGTAACCGCTTCACCGCGATCAAGCGCGCGGTGCCGTGGCGTCCGGGGCG
GGGCAGGAACAGCGTCGATGTGAGGGTGTACGGGCAGCAAACCGCGACAGTGCTTGCCGCTGGCGGGCTGGGTGCGCTGG
ACGTTGATGAGCACGGCCGCATCCTGATTCGGTTCCATTGGGACCGGGAAGGAAAGTTCAGTGCGCGTGTGCGGGTAGCG
AGCAATTGGGCGGGCGGCGAAACCGGCATGGTGTCGTGGCCGCGCGCGGGTAGCGAGGTGCTGGTCGTTGCCCTGGACGG
CAACCCCGACCACTTCCTCGTCATCGGCGTTGTCCACAACGCTCGCCGCATGCCGCCGTGGCAATTGCCCGCGCAGGGAG
CGCTGATGGGTATCCGCAGCCGGGAACTGACCCCGGACGGCGGCAACGATCCCGGAGGCCGCAGCAATCAGCTCGTTCTG
GACGACACGGCGGGCAAGATTCAAGCGCAACTCAAGAGCGATCACCTGCATAGCGCGCTGAGCCTGGGGCACATCACGCG
GATCGATGGCACGACCGGCCGGCAGAACCCACGCGGCCAGGGCTTCGCGCTGGACACCGATGGGCACGGTGCGAGCCGTG
CCGCTGGCGGGATGCAAGTCACTACGGAAGCCCTGTCCGGTGGACAGGGCAACATGATGGACGTGGGTGCGCCGGTAGCG
CGGTTGACGGTGGCGCACAACATGCACGAGCGCTTGTCGGAAGCGGCGTGTACCGCGGGGGCACAACAGGCCGACGACCA
AGGCGAGGTTGCCAAGCAATTGCACCAGCAGAATACCGACCTAAAGGGCAACGGCGGCGATCCGGCGCAAGGGCGGTTTC
CCGAGTTCCAGCAACCGCACTTGATGCTGGCCAGCCCGGCCGGAATCGAGAGCAGCACGGCGGGCAGTACGCACCAGCAG
AGCAACGCGCATCACGCGATCACCAGCGGCGGGCACGCCAGCATTGCCAGCGGGCGCAGCTTCCTCGCCAGTGCGAAGGA
TGCGATCCGGCTGTTTGCCTACCGGCTCGGCTTGAAGCTGGTGGCCGCGAGCGGCGACATCGACATGCAAGCGCTCAAGA
ACGGCATCAACATCCTGGCGAAGCTGGAGATCAAGATGGAGGGCAAGCGGGTGGACATCACCGGACTGGACGGGGTACGT
ATCAACGGGGGCGGAAGCTATATCGACGTCAGCCAGGCGGGGATTACGAGCGGCACCAACGGCCAGTTCCAGGTGCATTC
GGCTGACTATTCGTTCTCGGGGCCGGATAGCCGGCCAGTGGTGTCGCATGCGGTGACGTCGGCGTTGAAGCCTGATGAGC
CCTTGCGCGTGGTTGATGCGTTGGGCAACAGAGTTCCGGATAGCCATGTCATCGTGCGGCCCGGTCAGGACGAAACGCGC
ACGGTTATTGAGGGCGGGAAGGTTGCTCCCGACGCATCGCTCGACCACCACATCATTCGGCGCTGGCGCCCTCGGCGAGG
TTAA

Upstream 100 bases:

>100_bases
TACTTCATCGCCAGGGTTGATATTCGACGAATTGAATTTCTGACTTTCGTTTCAAAAATATCAACCCGGTCCTTTCGCCG
CCTCCTTCAGAAGTCTGCGT

Downstream 100 bases:

>100_bases
ACATGGGCATCTATTCAGAACCACTCAAGGAGGTATCGTTGGAACACAAGAATCGCCCCTTTTTTCGGCGGCAAGGTGTC
GGCATGCGCAGCGCGTTGCT

Product: VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; VgrG Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G

Number of amino acids: Translated: 907; Mature: 907

Protein sequence:

>907_residues
MQPRPLWPWLFSLVANIPRSESMAESDRTAHLHGILFFQQSNRLLGLSFPKDDTPTATDPRGRSFPVQMVVERLEAQEGL
GEDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRWFTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNRVF
RDRSLYEQIAEILQDYGAWAQWRWDASGADAPFTMAVQGGGQGESDHNYIHRRLEAQGWTYRYEHDATGHRLVIFDSNSQ
CPRVAGDHRIPFQAAGGPQEENAIQRWTPVQTAAAALFAASAFDFKQSQARHQAESTLRKQGRVPELEAHEYVGHYGFTK
EDPTGAALLNLRREEVEAHAEQYQAEGNNSSVAAGCWFELSEHFSNTEREEDSQYLIVAASHSASNNYLAELGRQGGREA
QPLAGRKGEYRNRFTAIKRAVPWRPGRGRNSVDVRVYGQQTATVLAAGGLGALDVDEHGRILIRFHWDREGKFSARVRVA
SNWAGGETGMVSWPRAGSEVLVVALDGNPDHFLVIGVVHNARRMPPWQLPAQGALMGIRSRELTPDGGNDPGGRSNQLVL
DDTAGKIQAQLKSDHLHSALSLGHITRIDGTTGRQNPRGQGFALDTDGHGASRAAGGMQVTTEALSGGQGNMMDVGAPVA
RLTVAHNMHERLSEAACTAGAQQADDQGEVAKQLHQQNTDLKGNGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQ
SNAHHAITSGGHASIASGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILAKLEIKMEGKRVDITGLDGVR
INGGGSYIDVSQAGITSGTNGQFQVHSADYSFSGPDSRPVVSHAVTSALKPDEPLRVVDALGNRVPDSHVIVRPGQDETR
TVIEGGKVAPDASLDHHIIRRWRPRRG

Sequences:

>Translated_907_residues
MQPRPLWPWLFSLVANIPRSESMAESDRTAHLHGILFFQQSNRLLGLSFPKDDTPTATDPRGRSFPVQMVVERLEAQEGL
GEDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRWFTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNRVF
RDRSLYEQIAEILQDYGAWAQWRWDASGADAPFTMAVQGGGQGESDHNYIHRRLEAQGWTYRYEHDATGHRLVIFDSNSQ
CPRVAGDHRIPFQAAGGPQEENAIQRWTPVQTAAAALFAASAFDFKQSQARHQAESTLRKQGRVPELEAHEYVGHYGFTK
EDPTGAALLNLRREEVEAHAEQYQAEGNNSSVAAGCWFELSEHFSNTEREEDSQYLIVAASHSASNNYLAELGRQGGREA
QPLAGRKGEYRNRFTAIKRAVPWRPGRGRNSVDVRVYGQQTATVLAAGGLGALDVDEHGRILIRFHWDREGKFSARVRVA
SNWAGGETGMVSWPRAGSEVLVVALDGNPDHFLVIGVVHNARRMPPWQLPAQGALMGIRSRELTPDGGNDPGGRSNQLVL
DDTAGKIQAQLKSDHLHSALSLGHITRIDGTTGRQNPRGQGFALDTDGHGASRAAGGMQVTTEALSGGQGNMMDVGAPVA
RLTVAHNMHERLSEAACTAGAQQADDQGEVAKQLHQQNTDLKGNGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQ
SNAHHAITSGGHASIASGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILAKLEIKMEGKRVDITGLDGVR
INGGGSYIDVSQAGITSGTNGQFQVHSADYSFSGPDSRPVVSHAVTSALKPDEPLRVVDALGNRVPDSHVIVRPGQDETR
TVIEGGKVAPDASLDHHIIRRWRPRRG
>Mature_907_residues
MQPRPLWPWLFSLVANIPRSESMAESDRTAHLHGILFFQQSNRLLGLSFPKDDTPTATDPRGRSFPVQMVVERLEAQEGL
GEDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRWFTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNRVF
RDRSLYEQIAEILQDYGAWAQWRWDASGADAPFTMAVQGGGQGESDHNYIHRRLEAQGWTYRYEHDATGHRLVIFDSNSQ
CPRVAGDHRIPFQAAGGPQEENAIQRWTPVQTAAAALFAASAFDFKQSQARHQAESTLRKQGRVPELEAHEYVGHYGFTK
EDPTGAALLNLRREEVEAHAEQYQAEGNNSSVAAGCWFELSEHFSNTEREEDSQYLIVAASHSASNNYLAELGRQGGREA
QPLAGRKGEYRNRFTAIKRAVPWRPGRGRNSVDVRVYGQQTATVLAAGGLGALDVDEHGRILIRFHWDREGKFSARVRVA
SNWAGGETGMVSWPRAGSEVLVVALDGNPDHFLVIGVVHNARRMPPWQLPAQGALMGIRSRELTPDGGNDPGGRSNQLVL
DDTAGKIQAQLKSDHLHSALSLGHITRIDGTTGRQNPRGQGFALDTDGHGASRAAGGMQVTTEALSGGQGNMMDVGAPVA
RLTVAHNMHERLSEAACTAGAQQADDQGEVAKQLHQQNTDLKGNGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQ
SNAHHAITSGGHASIASGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILAKLEIKMEGKRVDITGLDGVR
INGGGSYIDVSQAGITSGTNGQFQVHSADYSFSGPDSRPVVSHAVTSALKPDEPLRVVDALGNRVPDSHVIVRPGQDETR
TVIEGGKVAPDASLDHHIIRRWRPRRG

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98721; Mature: 98721

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRPLWPWLFSLVANIPRSESMAESDRTAHLHGILFFQQSNRLLGLSFPKDDTPTATDP
CCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCC
RGRSFPVQMVVERLEAQEGLGEDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRW
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEEEECCCCCEEE
FTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNRVFRDRSLYEQIAEILQDYGAWA
EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
QWRWDASGADAPFTMAVQGGGQGESDHNYIHRRLEAQGWTYRYEHDATGHRLVIFDSNSQ
EEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC
CPRVAGDHRIPFQAAGGPQEENAIQRWTPVQTAAAALFAASAFDFKQSQARHQAESTLRK
CCCCCCCCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRVPELEAHEYVGHYGFTKEDPTGAALLNLRREEVEAHAEQYQAEGNNSSVAAGCWFEL
CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
SEHFSNTEREEDSQYLIVAASHSASNNYLAELGRQGGREAQPLAGRKGEYRNRFTAIKRA
HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
VPWRPGRGRNSVDVRVYGQQTATVLAAGGLGALDVDEHGRILIRFHWDREGKFSARVRVA
CCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEEECCCCEEEEEEEECCCCCEEEEEEEE
SNWAGGETGMVSWPRAGSEVLVVALDGNPDHFLVIGVVHNARRMPPWQLPAQGALMGIRS
ECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCC
RELTPDGGNDPGGRSNQLVLDDTAGKIQAQLKSDHLHSALSLGHITRIDGTTGRQNPRGQ
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
GFALDTDGHGASRAAGGMQVTTEALSGGQGNMMDVGAPVARLTVAHNMHERLSEAACTAG
CEEECCCCCCCCCCCCCCEEEHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC
AQQADDQGEVAKQLHQQNTDLKGNGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQ
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
SNAHHAITSGGHASIASGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILA
CCCCEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHCCCEEEE
KLEIKMEGKRVDITGLDGVRINGGGSYIDVSQAGITSGTNGQFQVHSADYSFSGPDSRPV
EEEEEECCCEEEEECCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCH
VSHAVTSALKPDEPLRVVDALGNRVPDSHVIVRPGQDETRTVIEGGKVAPDASLDHHIIR
HHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHH
RWRPRRG
HCCCCCC
>Mature Secondary Structure
MQPRPLWPWLFSLVANIPRSESMAESDRTAHLHGILFFQQSNRLLGLSFPKDDTPTATDP
CCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCC
RGRSFPVQMVVERLEAQEGLGEDFRFELTLLADHAGLVLADMLGKLLAVSLVKPDGTLRW
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEEEECCCCCEEE
FTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNRVFRDRSLYEQIAEILQDYGAWA
EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
QWRWDASGADAPFTMAVQGGGQGESDHNYIHRRLEAQGWTYRYEHDATGHRLVIFDSNSQ
EEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC
CPRVAGDHRIPFQAAGGPQEENAIQRWTPVQTAAAALFAASAFDFKQSQARHQAESTLRK
CCCCCCCCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRVPELEAHEYVGHYGFTKEDPTGAALLNLRREEVEAHAEQYQAEGNNSSVAAGCWFEL
CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
SEHFSNTEREEDSQYLIVAASHSASNNYLAELGRQGGREAQPLAGRKGEYRNRFTAIKRA
HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
VPWRPGRGRNSVDVRVYGQQTATVLAAGGLGALDVDEHGRILIRFHWDREGKFSARVRVA
CCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEEECCCCEEEEEEEECCCCCEEEEEEEE
SNWAGGETGMVSWPRAGSEVLVVALDGNPDHFLVIGVVHNARRMPPWQLPAQGALMGIRS
ECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCC
RELTPDGGNDPGGRSNQLVLDDTAGKIQAQLKSDHLHSALSLGHITRIDGTTGRQNPRGQ
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
GFALDTDGHGASRAAGGMQVTTEALSGGQGNMMDVGAPVARLTVAHNMHERLSEAACTAG
CEEECCCCCCCCCCCCCCEEEHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC
AQQADDQGEVAKQLHQQNTDLKGNGGDPAQGRFPEFQQPHLMLASPAGIESSTAGSTHQQ
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
SNAHHAITSGGHASIASGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILA
CCCCEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHCCCEEEE
KLEIKMEGKRVDITGLDGVRINGGGSYIDVSQAGITSGTNGQFQVHSADYSFSGPDSRPV
EEEEEECCCEEEEECCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCH
VSHAVTSALKPDEPLRVVDALGNRVPDSHVIVRPGQDETRTVIEGGKVAPDASLDHHIIR
HHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHH
RWRPRRG
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA