Click here to switch to the map view.

The map label for this gene is 17545630

Identifier: 17545630

GI number: 17545630

Start: 962874

End: 963260

Strand: Direct

Name: 17545630

Synonym: RSc0911

Alternate gene names: NA

Gene position: 962874-963260 (Clockwise)

Preceding gene: 17545629

Following gene: 17545631

Centisome position: 25.91

GC content: 66.67

Gene sequence:

>387_bases
ATGCGGCACAACCCGGCCATCACGCGCTGCGCGGGTCTCCGCGTCGCCGTCCGTTCCCGAAACCGCATGAAATTGTTCGT
CTGGGTCGTCCGCATCCTGTTGTTTGTGCTGCTTTTCGTGCTTGCGCTGCACAACACGGCGGAAGTCTCGCTTGTGCTGC
CGTTCGGCGTTGTCTGGCATGCGCCCCTGATCCTGATCGCCCTGGCGTTTTTCGTGGCCGGCCTGCTGCTGGCCATGCTG
GCGATGGCGCCGCGCGTGATGCGGCACCGGTTCACCGCCAGCCGGCTGCGCAGGCAGCTCGGTCGCATGAAGGCCGAGGA
GGCCGTCGAGCCGAAGGCGCCGGTCGTCGCCGATTCTCCCTACCACGTTCCCGGCCCCAAGGTCTGA

Upstream 100 bases:

>100_bases
GGTTTCAAGAACGCCCCGGTTTTCCCGGGGCGTTTTTTTATGGCGCGGACGTGCCGCCGGGGCCTTGGCGCGTGGCTGGG
CCCAACCCGAATCCGCTACA

Downstream 100 bases:

>100_bases
CGCATGGATTTTGATCTCTGGTGGCTGCTGGCCATCCCCCTGGTGTTCGGCTTGGGCTGGGTGGCGGCCCGGCTGGATGC
CCGACAACTGCTGACCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRHNPAITRCAGLRVAVRSRNRMKLFVWVVRILLFVLLFVLALHNTAEVSLVLPFGVVWHAPLILIALAFFVAGLLLAML
AMAPRVMRHRFTASRLRRQLGRMKAEEAVEPKAPVVADSPYHVPGPKV

Sequences:

>Translated_128_residues
MRHNPAITRCAGLRVAVRSRNRMKLFVWVVRILLFVLLFVLALHNTAEVSLVLPFGVVWHAPLILIALAFFVAGLLLAML
AMAPRVMRHRFTASRLRRQLGRMKAEEAVEPKAPVVADSPYHVPGPKV
>Mature_128_residues
MRHNPAITRCAGLRVAVRSRNRMKLFVWVVRILLFVLLFVLALHNTAEVSLVLPFGVVWHAPLILIALAFFVAGLLLAML
AMAPRVMRHRFTASRLRRQLGRMKAEEAVEPKAPVVADSPYHVPGPKV

Specific function: Unknown

COG id: COG5416

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14368; Mature: 14368

Theoretical pI: Translated: 12.39; Mature: 12.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHNPAITRCAGLRVAVRSRNRMKLFVWVVRILLFVLLFVLALHNTAEVSLVLPFGVVWH
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
APLILIALAFFVAGLLLAMLAMAPRVMRHRFTASRLRRQLGRMKAEEAVEPKAPVVADSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
YHVPGPKV
CCCCCCCC
>Mature Secondary Structure
MRHNPAITRCAGLRVAVRSRNRMKLFVWVVRILLFVLLFVLALHNTAEVSLVLPFGVVWH
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
APLILIALAFFVAGLLLAMLAMAPRVMRHRFTASRLRRQLGRMKAEEAVEPKAPVVADSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
YHVPGPKV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA