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The map label for this gene is ycfJ [C]

Identifier: 17545618

GI number: 17545618

Start: 948718

End: 949221

Strand: Direct

Name: ycfJ [C]

Synonym: RSc0899

Alternate gene names: 17545618

Gene position: 948718-949221 (Clockwise)

Preceding gene: 17545614

Following gene: 17545620

Centisome position: 25.53

GC content: 68.65

Gene sequence:

>504_bases
ATGAAGCAGAAACGTGTTCTGGCGGGGCTTGGCCTCGCCGGCCTTGCAGTGTTGGCAGGTTGTGCCGCGCCTGGCTATGG
CGGCGGTTATGGCGCTGGCTACGGTGGTGGTGGCGGTTATGCGCCCGCGCCGGCGTACGGTGGTCAGCCCCAGCAGTCCG
GTGCCCTCTATGGCCGGGTCGAGTCGATCGAGCCGATGCAGGCTCCGGCCAACAGCCCCGGTATTCTCGGCACCATCATC
GGCGGCGTGGCGGGTGGCGTGCTGGGGCACCAGATCGGTGGCGGTACCGGCAATACGGTGGCCACCATCGGCGGCGCGGC
CCTGGGTGCCCTGGCGGGCAATCAGGTGGAGCGGGCTGCCGGCGCCGGCGGGCAAACCGTCTATCGCGTGACCGTCAGGT
TGGACGACGGCCGGGTCGCCACGGTCACGCAGCGCAATCCGAATAATCTGCGCGTAGGCGACCGTGCGATGGTCGCCAAC
GATCAGGCAACGCCGTCCTATTGA

Upstream 100 bases:

>100_bases
ACCAAATCACCTCGCGCGATAAAAGCGTTTCATATTGAAACAGGAACGAACAAACGTGCGCTTACGCTCTCCAATTGTCA
CCCTTGCTCTGGGAGAAATC

Downstream 100 bases:

>100_bases
GGGAGCGTGTCCGGCGACAGATTGCCGGAGGATCCAAACGTCAGAGGGCGATGACGCGAAAACGTCACCGCCCTTTTTCA
TGCCCTGCGAAGCTTGGCTG

Product: outer membrane lipoprotein transmembrane

Products: NA

Alternate protein names: Surface Antigen Protein; Outer-Membrane Lipoprotein Transmembrane; Outer Membrane Lipoprotein Transmembrane; 17 KDa Surface Antigen-Like Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKQKRVLAGLGLAGLAVLAGCAAPGYGGGYGAGYGGGGGYAPAPAYGGQPQQSGALYGRVESIEPMQAPANSPGILGTII
GGVAGGVLGHQIGGGTGNTVATIGGAALGALAGNQVERAAGAGGQTVYRVTVRLDDGRVATVTQRNPNNLRVGDRAMVAN
DQATPSY

Sequences:

>Translated_167_residues
MKQKRVLAGLGLAGLAVLAGCAAPGYGGGYGAGYGGGGGYAPAPAYGGQPQQSGALYGRVESIEPMQAPANSPGILGTII
GGVAGGVLGHQIGGGTGNTVATIGGAALGALAGNQVERAAGAGGQTVYRVTVRLDDGRVATVTQRNPNNLRVGDRAMVAN
DQATPSY
>Mature_167_residues
MKQKRVLAGLGLAGLAVLAGCAAPGYGGGYGAGYGGGGGYAPAPAYGGQPQQSGALYGRVESIEPMQAPANSPGILGTII
GGVAGGVLGHQIGGGTGNTVATIGGAALGALAGNQVERAAGAGGQTVYRVTVRLDDGRVATVTQRNPNNLRVGDRAMVAN
DQATPSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16177; Mature: 16177

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKRVLAGLGLAGLAVLAGCAAPGYGGGYGAGYGGGGGYAPAPAYGGQPQQSGALYGRV
CCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
ESIEPMQAPANSPGILGTIIGGVAGGVLGHQIGGGTGNTVATIGGAALGALAGNQVERAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCHHHHHH
GAGGQTVYRVTVRLDDGRVATVTQRNPNNLRVGDRAMVANDQATPSY
CCCCCEEEEEEEEECCCEEEEEEECCCCCEEECCEEEEECCCCCCCC
>Mature Secondary Structure
MKQKRVLAGLGLAGLAVLAGCAAPGYGGGYGAGYGGGGGYAPAPAYGGQPQQSGALYGRV
CCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
ESIEPMQAPANSPGILGTIIGGVAGGVLGHQIGGGTGNTVATIGGAALGALAGNQVERAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCHHHHHH
GAGGQTVYRVTVRLDDGRVATVTQRNPNNLRVGDRAMVANDQATPSY
CCCCCEEEEEEEEECCCEEEEEEECCCCCEEECCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA