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The map label for this gene is 17545558

Identifier: 17545558

GI number: 17545558

Start: 879632

End: 881929

Strand: Direct

Name: 17545558

Synonym: RSc0839

Alternate gene names: NA

Gene position: 879632-881929 (Clockwise)

Preceding gene: 17545557

Following gene: 17545559

Centisome position: 23.67

GC content: 67.28

Gene sequence:

>2298_bases
ATGCTCGACTTCAATGACAGCCCATCGCAGAGCCGGGAGGTCGCTCGTCCCGCATCCTCGGACGGGGAGCGGGAGCGCAT
CCGGGGCCTGCTGCTCGACCGGCTGGACTCGGTGCTGGCCATCCTGTTTCCGGCCGGCAAGAAGCGACGCAACAAGTTCG
TGATCGGCGACATCCAGGGCAACCTCGGCGACAGCCTGGAAATCGTGCTCGACGGCGAGAAGGCTGGTTTGTGGACGGAC
CGCGCGACGGGCGACGGCGGGGATGTGTTCGCCGTGATCGCGGGCACCCTGGGTGTCGATGTGCAGACGGAATTCCCGAG
GGTGCTGGCGCGCGCTGCTGACCTGCTTGGTCTCGCCAGCACGCAGCCAGTGCGGCGCAAGCGGAAGGAGCCGCCGACGG
ACGACCTCGGCCCCGAGACCGCCAAGTGGGACTACCTGGACGCCGCCGGCAGGCTGATCGGGGTGGTGTACCGCTACGAC
CCGCCCGGCCGGGGCAAGGAGTTCCGGCCGTGGGACGCCAAGCGGCGCAAGATGGCCCCGCCCGATCCACGCCCGCTGTA
CAACCAGCCCGGACTGGCGAGCGCCACGCAGGTCGTGTTGGTCGAGGGTGAGAAATGCGCCCAGGCCCTGATCGACGCTG
GCATCGTTGCCACTACGGCCATGCACGGGGCGAACGCGCCCGTGGAGAAGACCGACTGGTCGCCTCTGGCCGGCAAGGCC
GTGCTGATCTGGCCCGACCGGGATAAGCCGGGCTGGGAGTATGCCGACCGGGCGTCGCAGGCGATCCTGCAGGCGGGCGC
GTTGTTGGTGGCCATCCTGCTGCCGCCGGACGACAAGCCGGAGGGCTGGGATGCAGCCGACGCGATCGAAGAGGGGTTCG
ACGTCGCCGGCTACCTCGCAGCCGGCGCGCGGGTGCCCGTGGTGCCGGAGGTGGACGACAGCGTGTCGGCAGACGTGCTG
GAGGGCGTGGATTGGGAAACCGAGGACGGGCTGGCCACGGCCTTCACGCGCCGCTATGGCGACGACTGGCGCTACTGCTC
CCTGTGGGGCAAGTGGCTGGTGTGGACCGGCGTGCGCTGGAATCCCGACCAACTGCTCTACATCACCCACCTGTCGCGTG
GGATCTGCCGTGCGGCTTCGTTCAAGGCGGAAACGCCGCGGCAGAAGGCCAAGCTGGCGAGCTCGTCGACCATCGCCTCG
GTCGAGAAGATCGCCCGTTCGGACCCCAAGCACGCGGCCACGGCCGACGAGTGGGATGCGGACGTGTGGGCGCTCAACAC
CCCCGGCGGCGTGGTCGATCTGCGCACGGGCCAGTTGCGAGCGCATCGGCGCGAGGACCGGATGACGAAGGTGACCACGG
CGACGCCTAAGGGCGATTGCCCGACCTGGCGGCAGTTTCTCTCGGAAGTCACGGGCGGCGACGTCGAGCTGCAAGCCTAC
CTGCAACGGATGGCGGGTTACGCGCTGACCGGGTCGACACAGGAGCATGCGCTGTTCTTCCTGTACGGCACGGGCGCGAA
CGGCAAGTCGGTGTTCGTCAACACGCTGGCCACGATCCTGGGCGACTACGCGGTCAACGCGGCGATGGACACCTTCATGG
AAACGCGCGCCGACCGGCATCCGACCGACATGGCGGGCCTGCGAGGCGCGCGCTTCGTGGCGGCCATCGAGACCGAGCAG
GGACGGCGCTGGGCGGAATCCAAGGTCAAGAACCTCACCGGTGGCGACAAGATCTCCGCACGCTTCATGCGGCAAGACTT
CTTCGAGTTCTTCCCGCAGTTCAAGCTGTTCGTCGCGGGCAACCACAAACCGGCCATCCGCAACATCGACGAGGCGATGA
AGCGACGCCTGCACTTGATTCCGTTCACGGTGACGGTGCCGCCTGCGCGGCGTGACAAGACCTTGCAGCAGAAGCTGCTG
GCAGAACGTGACGGCATCCTGGCGTGGGCGGTTCAGGGTTGTCTCGACTGGCAGCGGCTGGGCCGGCTCGATCCGCCGCA
ACAGGTGCTGGACGCGACGGAGGAGTATTTCGAGGCCGAGGACGCGCTGGGCCGCTGGCTGGACGAACGTTGTGTGCGAG
AGATCAACGCCAAGACGCTGACCGCCGAGTTGTTCAACGACTGGAAACAGTGGGCTGACTCGGCTGGCGAATTCGTCGGA
TCGCAAAGGCGCTTCTCCGATCTGCTGATCACCCGCGGGGTTGAGAAATGGCGCAACACAGCGGGTTTGCGGGGCTTCCG
TGGTGTGAGCCTGAAGCATCCGCCGATGCCGACCTATAGCCCGTACTCGGACAACTGA

Upstream 100 bases:

>100_bases
GCTGGGCTGATCGACCTCAATCCCGCGTTCGTTCGCGAGGTGGCGGTCAAGACCGGCTACCTCCTGGCGGCTCCTGAAGA
ACTGCAAGAACGGAGCGCCC

Downstream 100 bases:

>100_bases
GCTTCACGCCGACACATCCGACCGACGCAGCTGACGTACTACGTCGTAACTCCTACGCGTACGTGCGCGTACACGCACCT
CAAGGGCGTTTCGATGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase/Helicase; Primase; Phage DNA Polymerase; Phage/Plasmid Primase; Regulatory Protein RepA; Phage Primase; TOPRIM Domain-Containing Protein; Phage Related Protein; Bacteriophage-Related Protein; Phage-Like Protein; Nucleoside Triphosphatase D5 Family; Phage-Associated Protein; Phage/Plasmid DNA Primase; DNA Primase; Phage/Plasmid Primase P4-Like; Phage DNA Primase; Phage/Plasmid Primase P4 C-Terminal Protein; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; Prophage; Plasmid/Phage Primase; Bacteriophage Protein; Primase P4-Like Protein; Inner Membrane Protein; DNA/RNA Helicase; Prim Domain Protein; Phage Or Plasmid Primase P4-Like; D5 N-Terminal Domain Family Protein; Phage Associated DNA Primase; TOPRIM Domain Protein; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MLDFNDSPSQSREVARPASSDGERERIRGLLLDRLDSVLAILFPAGKKRRNKFVIGDIQGNLGDSLEIVLDGEKAGLWTD
RATGDGGDVFAVIAGTLGVDVQTEFPRVLARAADLLGLASTQPVRRKRKEPPTDDLGPETAKWDYLDAAGRLIGVVYRYD
PPGRGKEFRPWDAKRRKMAPPDPRPLYNQPGLASATQVVLVEGEKCAQALIDAGIVATTAMHGANAPVEKTDWSPLAGKA
VLIWPDRDKPGWEYADRASQAILQAGALLVAILLPPDDKPEGWDAADAIEEGFDVAGYLAAGARVPVVPEVDDSVSADVL
EGVDWETEDGLATAFTRRYGDDWRYCSLWGKWLVWTGVRWNPDQLLYITHLSRGICRAASFKAETPRQKAKLASSSTIAS
VEKIARSDPKHAATADEWDADVWALNTPGGVVDLRTGQLRAHRREDRMTKVTTATPKGDCPTWRQFLSEVTGGDVELQAY
LQRMAGYALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAVNAAMDTFMETRADRHPTDMAGLRGARFVAAIETEQ
GRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAIRNIDEAMKRRLHLIPFTVTVPPARRDKTLQQKLL
AERDGILAWAVQGCLDWQRLGRLDPPQQVLDATEEYFEAEDALGRWLDERCVREINAKTLTAELFNDWKQWADSAGEFVG
SQRRFSDLLITRGVEKWRNTAGLRGFRGVSLKHPPMPTYSPYSDN

Sequences:

>Translated_765_residues
MLDFNDSPSQSREVARPASSDGERERIRGLLLDRLDSVLAILFPAGKKRRNKFVIGDIQGNLGDSLEIVLDGEKAGLWTD
RATGDGGDVFAVIAGTLGVDVQTEFPRVLARAADLLGLASTQPVRRKRKEPPTDDLGPETAKWDYLDAAGRLIGVVYRYD
PPGRGKEFRPWDAKRRKMAPPDPRPLYNQPGLASATQVVLVEGEKCAQALIDAGIVATTAMHGANAPVEKTDWSPLAGKA
VLIWPDRDKPGWEYADRASQAILQAGALLVAILLPPDDKPEGWDAADAIEEGFDVAGYLAAGARVPVVPEVDDSVSADVL
EGVDWETEDGLATAFTRRYGDDWRYCSLWGKWLVWTGVRWNPDQLLYITHLSRGICRAASFKAETPRQKAKLASSSTIAS
VEKIARSDPKHAATADEWDADVWALNTPGGVVDLRTGQLRAHRREDRMTKVTTATPKGDCPTWRQFLSEVTGGDVELQAY
LQRMAGYALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAVNAAMDTFMETRADRHPTDMAGLRGARFVAAIETEQ
GRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAIRNIDEAMKRRLHLIPFTVTVPPARRDKTLQQKLL
AERDGILAWAVQGCLDWQRLGRLDPPQQVLDATEEYFEAEDALGRWLDERCVREINAKTLTAELFNDWKQWADSAGEFVG
SQRRFSDLLITRGVEKWRNTAGLRGFRGVSLKHPPMPTYSPYSDN
>Mature_765_residues
MLDFNDSPSQSREVARPASSDGERERIRGLLLDRLDSVLAILFPAGKKRRNKFVIGDIQGNLGDSLEIVLDGEKAGLWTD
RATGDGGDVFAVIAGTLGVDVQTEFPRVLARAADLLGLASTQPVRRKRKEPPTDDLGPETAKWDYLDAAGRLIGVVYRYD
PPGRGKEFRPWDAKRRKMAPPDPRPLYNQPGLASATQVVLVEGEKCAQALIDAGIVATTAMHGANAPVEKTDWSPLAGKA
VLIWPDRDKPGWEYADRASQAILQAGALLVAILLPPDDKPEGWDAADAIEEGFDVAGYLAAGARVPVVPEVDDSVSADVL
EGVDWETEDGLATAFTRRYGDDWRYCSLWGKWLVWTGVRWNPDQLLYITHLSRGICRAASFKAETPRQKAKLASSSTIAS
VEKIARSDPKHAATADEWDADVWALNTPGGVVDLRTGQLRAHRREDRMTKVTTATPKGDCPTWRQFLSEVTGGDVELQAY
LQRMAGYALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAVNAAMDTFMETRADRHPTDMAGLRGARFVAAIETEQ
GRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAGNHKPAIRNIDEAMKRRLHLIPFTVTVPPARRDKTLQQKLL
AERDGILAWAVQGCLDWQRLGRLDPPQQVLDATEEYFEAEDALGRWLDERCVREINAKTLTAELFNDWKQWADSAGEFVG
SQRRFSDLLITRGVEKWRNTAGLRGFRGVSLKHPPMPTYSPYSDN

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84781; Mature: 84781

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFNDSPSQSREVARPASSDGERERIRGLLLDRLDSVLAILFPAGKKRRNKFVIGDIQG
CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
NLGDSLEIVLDGEKAGLWTDRATGDGGDVFAVIAGTLGVDVQTEFPRVLARAADLLGLAS
CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCC
TQPVRRKRKEPPTDDLGPETAKWDYLDAAGRLIGVVYRYDPPGRGKEFRPWDAKRRKMAP
CCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHCCCCC
PDPRPLYNQPGLASATQVVLVEGEKCAQALIDAGIVATTAMHGANAPVEKTDWSPLAGKA
CCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VLIWPDRDKPGWEYADRASQAILQAGALLVAILLPPDDKPEGWDAADAIEEGFDVAGYLA
EEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHH
AGARVPVVPEVDDSVSADVLEGVDWETEDGLATAFTRRYGDDWRYCSLWGKWLVWTGVRW
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEECCEE
NPDQLLYITHLSRGICRAASFKAETPRQKAKLASSSTIASVEKIARSDPKHAATADEWDA
CCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DVWALNTPGGVVDLRTGQLRAHRREDRMTKVTTATPKGDCPTWRQFLSEVTGGDVELQAY
CEEEECCCCCEEEECCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHH
LQRMAGYALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAVNAAMDTFMETRADRH
HHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTDMAGLRGARFVAAIETEQGRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAG
CCHHHHCCCCEEEEEEECHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
NHKPAIRNIDEAMKRRLHLIPFTVTVPPARRDKTLQQKLLAERDGILAWAVQGCLDWQRL
CCCCHHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GRLDPPQQVLDATEEYFEAEDALGRWLDERCVREINAKTLTAELFNDWKQWADSAGEFVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
SQRRFSDLLITRGVEKWRNTAGLRGFRGVSLKHPPMPTYSPYSDN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDFNDSPSQSREVARPASSDGERERIRGLLLDRLDSVLAILFPAGKKRRNKFVIGDIQG
CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
NLGDSLEIVLDGEKAGLWTDRATGDGGDVFAVIAGTLGVDVQTEFPRVLARAADLLGLAS
CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCC
TQPVRRKRKEPPTDDLGPETAKWDYLDAAGRLIGVVYRYDPPGRGKEFRPWDAKRRKMAP
CCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHCCCCC
PDPRPLYNQPGLASATQVVLVEGEKCAQALIDAGIVATTAMHGANAPVEKTDWSPLAGKA
CCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VLIWPDRDKPGWEYADRASQAILQAGALLVAILLPPDDKPEGWDAADAIEEGFDVAGYLA
EEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHH
AGARVPVVPEVDDSVSADVLEGVDWETEDGLATAFTRRYGDDWRYCSLWGKWLVWTGVRW
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEECCEE
NPDQLLYITHLSRGICRAASFKAETPRQKAKLASSSTIASVEKIARSDPKHAATADEWDA
CCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DVWALNTPGGVVDLRTGQLRAHRREDRMTKVTTATPKGDCPTWRQFLSEVTGGDVELQAY
CEEEECCCCCEEEECCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHH
LQRMAGYALTGSTQEHALFFLYGTGANGKSVFVNTLATILGDYAVNAAMDTFMETRADRH
HHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTDMAGLRGARFVAAIETEQGRRWAESKVKNLTGGDKISARFMRQDFFEFFPQFKLFVAG
CCHHHHCCCCEEEEEEECHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
NHKPAIRNIDEAMKRRLHLIPFTVTVPPARRDKTLQQKLLAERDGILAWAVQGCLDWQRL
CCCCHHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GRLDPPQQVLDATEEYFEAEDALGRWLDERCVREINAKTLTAELFNDWKQWADSAGEFVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
SQRRFSDLLITRGVEKWRNTAGLRGFRGVSLKHPPMPTYSPYSDN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA