Click here to switch to the map view.

The map label for this gene is 17545557

Identifier: 17545557

GI number: 17545557

Start: 879238

End: 879648

Strand: Direct

Name: 17545557

Synonym: RSc0838

Alternate gene names: NA

Gene position: 879238-879648 (Clockwise)

Preceding gene: 17545556

Following gene: 17545558

Centisome position: 23.66

GC content: 65.45

Gene sequence:

>411_bases
GTGGTAACCGAGATGCTGGATTTCAATCATCGCAATCACCGCTCTAAAACCCGCAGCGCCATTGATCCGCGCCGCGCCCG
TCGAGCCGCGCGTCCGCGCCCCCTGGTGACCATGCGAGTCGTGGAGCGGCTGCTGCAGCGCCACGTCAATGCGCCGGTCA
CAGGGCTTATGCCCGAGCAGCGCCTGATCTTGGCGGTGCTCTGCCAGGCCATCGCCGACGCCCGTTATGGGGAGAACCGG
TCCGTGCAGGAGGACGCAGAGCGCTTCCTGCGCGGCGACGATCTCGCGCAGGTGGCTGGGCTGATCGACCTCAATCCCGC
GTTCGTTCGCGAGGTGGCGGTCAAGACCGGCTACCTCCTGGCGGCTCCTGAAGAACTGCAAGAACGGAGCGCCCATGCTC
GACTTCAATGA

Upstream 100 bases:

>100_bases
TGGCGCTCGATGCGCCGCGCGCCCAGGCCACCTCGATGGGCCAGAGGCGTTCCGTAGGACTGTCGGCGGATGCGTTCGCC
GACTTGGAAGATGACATTCC

Downstream 100 bases:

>100_bases
CAGCCCATCGCAGAGCCGGGAGGTCGCTCGTCCCGCATCCTCGGACGGGGAGCGGGAGCGCATCCGGGGCCTGCTGCTCG
ACCGGCTGGACTCGGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MVTEMLDFNHRNHRSKTRSAIDPRRARRAARPRPLVTMRVVERLLQRHVNAPVTGLMPEQRLILAVLCQAIADARYGENR
SVQEDAERFLRGDDLAQVAGLIDLNPAFVREVAVKTGYLLAAPEELQERSAHARLQ

Sequences:

>Translated_136_residues
MVTEMLDFNHRNHRSKTRSAIDPRRARRAARPRPLVTMRVVERLLQRHVNAPVTGLMPEQRLILAVLCQAIADARYGENR
SVQEDAERFLRGDDLAQVAGLIDLNPAFVREVAVKTGYLLAAPEELQERSAHARLQ
>Mature_136_residues
MVTEMLDFNHRNHRSKTRSAIDPRRARRAARPRPLVTMRVVERLLQRHVNAPVTGLMPEQRLILAVLCQAIADARYGENR
SVQEDAERFLRGDDLAQVAGLIDLNPAFVREVAVKTGYLLAAPEELQERSAHARLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15458; Mature: 15458

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTEMLDFNHRNHRSKTRSAIDPRRARRAARPRPLVTMRVVERLLQRHVNAPVTGLMPEQ
CCCCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
RLILAVLCQAIADARYGENRSVQEDAERFLRGDDLAQVAGLIDLNPAFVREVAVKTGYLL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCE
AAPEELQERSAHARLQ
ECHHHHHHHHHHCCCC
>Mature Secondary Structure
MVTEMLDFNHRNHRSKTRSAIDPRRARRAARPRPLVTMRVVERLLQRHVNAPVTGLMPEQ
CCCCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
RLILAVLCQAIADARYGENRSVQEDAERFLRGDDLAQVAGLIDLNPAFVREVAVKTGYLL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCE
AAPEELQERSAHARLQ
ECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA