Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is gltK [H]
Identifier: 17545202
GI number: 17545202
Start: 519178
End: 519861
Strand: Direct
Name: gltK [H]
Synonym: RSc0483
Alternate gene names: 17545202
Gene position: 519178-519861 (Clockwise)
Preceding gene: 17545201
Following gene: 17545203
Centisome position: 13.97
GC content: 61.7
Gene sequence:
>684_bases ATGGCTTATCAATTCGATTTCACGTCCGTCAACGCCGACAACCTGCGCGTGCTCGGCGAAGGCATGGTCCTGTCGCTCGA GATCACGGCCACGGCCATTCTGGTCGGCATCGTCTGGGGCACGCTGCTGGCGATGATGCGCCTGTCGGGCATCAAGCCGC TGCAGTGGTTCGGGCAGGCCTATGTGAACCTCTTCCGCTCCATCCCGCTGGTGATGGTGCTGCTGTGGTTCTTCCTGATC GTGCCGCAGGTGCTGCAGAAGCTCTTCAACCTGTCGCCGGCCACCGACATGCGCATGACCTCCGCGCTGGTCGCCTTCGC GCTGTTCGAGGCGGCGTACTACTCGGAGATCATCCGCGCCGGCATCCAGAGCGTCTCGCGCGGGCAGATGTTCGCGGCCT ATGCGATGGGCATGACGTACGGCCAGGCCATGCGCCTGGTGATCCTGCCGCAGGCTTTCCGCAACATGATCCCGCTGCTG CTCACGCAGGCCATCATCCTGTTCCAGGATACGTCGCTGGTGTATGTGAGCGCGCTGTCGGATTTCTTTACGCAGGCTTA CAACATCGGTGAGCGCGATGGCCGCATCGTCGAGCTGCTGCTGTTTGCCGGCTTTTGCTATTTCGTGATCTGCTTCGGCG CCTCCGTGCTGGTGAAGCGGCTTCAGAAGAAGGTGACCCAATGA
Upstream 100 bases:
>100_bases TGATCAACCTGACCGTCATGGGAATCATGCGCTGGGTTGAAGCACGTACCCGGCTGCCCGGTTTCATCGGCGGCAAGTAA GCCGGCACGCGAGGATATTC
Downstream 100 bases:
>100_bases TCGAGATCAAGAACGTTTCCAAGTGGTACGGCCAGTTCCAAGTGCTGACCGACTGCACCACCAGCGTGAAGAAGAGCGAG GTGGTGGTGGTGTGCGGCCC
Product: glutamate/aspartate transmembrane ABC transporter protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MAYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVLLWFFLI VPQVLQKLFNLSPATDMRMTSALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKVTQ
Sequences:
>Translated_227_residues MAYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVLLWFFLI VPQVLQKLFNLSPATDMRMTSALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKVTQ >Mature_226_residues AYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVLLWFFLIV PQVLQKLFNLSPATDMRMTSALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLL TQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKVTQ
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=63.5135135135135, Blast_Score=294, Evalue=4e-81, Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=33.0232558139535, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=28.7292817679558, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1787030, Length=221, Percent_Identity=27.1493212669683, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=24.5614035087719, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=24.8803827751196, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI48994930, Length=123, Percent_Identity=30.0813008130081, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25453; Mature: 25322
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQA CCEEECCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YVNLFRSIPLVMVLLWFFLIVPQVLQKLFNLSPATDMRMTSALVAFALFEAAYYSEIIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLVYVSALS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKVTQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQA CEEECCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YVNLFRSIPLVMVLLWFFLIVPQVLQKLFNLSPATDMRMTSALVAFALFEAAYYSEIIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLVYVSALS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKVTQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]