Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is gltJ [H]
Identifier: 17545201
GI number: 17545201
Start: 518429
End: 519157
Strand: Direct
Name: gltJ [H]
Synonym: RSc0482
Alternate gene names: 17545201
Gene position: 518429-519157 (Clockwise)
Preceding gene: 17545200
Following gene: 17545202
Centisome position: 13.95
GC content: 63.1
Gene sequence:
>729_bases ATGAATTACCACTGGAACTGGGGCGTCTTCTTCACCGAAGCCGCGCAGAATCAGACCTACCTTGACTGGCTGCTTTCGGG GTTGAAGACCACGATCGCGCTGGGCCTGTCCTCCTGGATCATCGCGCTCGTCCTTGGCTCCGTGCTGGGCGTGCTGCGCA CCGTGCCCAGCAAGGCGCTGTCGGGCCTTGCCACGGCCTACGTGGAGCTGTTCCGCAACATCCCGCTGATCGTGCAGCTG TTCATCTGGTATTTCGTCATGCCGGAACTGGTGCCGGGCGGCGACTACATCAAGCAGATGAACCCCGCCACGGCGATGTT CCTGTGCGCGATGCTGTGCCTCGGTACTTTTACCGCGGCGCGGGTGTGCGAACAGGTGCGCTCGGGCATCAACTCGCTGC CGCGCGGCCAGCGCAACGCCGGCCTGGCGATGGGCTTCACGCTGGCGCAGACGTACCGCCACGTCATGCTGCCGATGGCG TTCCGCATCATCGTGCCGCCGCTCACCTCCGAGTTCCTGAACATCTTCAAGAACTCCGCGGTGGCGTCGACCATCGGTCT GCTGGAGCTCGCGGCACAGGGGCGCCAACTGGTGGACTACACCGCGCAGCCCTACGAGTCGTTCATCGCCGTGACACTGA TGTACATGCTGATCAACCTGACCGTCATGGGAATCATGCGCTGGGTTGAAGCACGTACCCGGCTGCCCGGTTTCATCGGC GGCAAGTAA
Upstream 100 bases:
>100_bases ATCGGCTCCCTCAGGAACGAGCAACGCTGAGCATCATTGAAACGGAAGGCAAAGGCCGGTTGACAGGCCCTCCCTTCCGT TTCTTTTTGAGGGAACCATC
Downstream 100 bases:
>100_bases GCCGGCACGCGAGGATATTCATGGCTTATCAATTCGATTTCACGTCCGTCAACGCCGACAACCTGCGCGTGCTCGGCGAA GGCATGGTCCTGTCGCTCGA
Product: glutamate/aspartate transmembrane ABC transporter protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MNYHWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIPLIVQL FIWYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMA FRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRLPGFIG GK
Sequences:
>Translated_242_residues MNYHWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIPLIVQL FIWYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMA FRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRLPGFIG GK >Mature_242_residues MNYHWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIPLIVQL FIWYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMA FRIIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRLPGFIG GK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=246, Percent_Identity=58.5365853658537, Blast_Score=298, Evalue=2e-82, Organism=Escherichia coli, GI1788226, Length=195, Percent_Identity=32.3076923076923, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=27.5700934579439, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=30.6976744186047, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=27.6995305164319, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=35.2459016393443, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=28.0952380952381, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=23.7668161434978, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=25.7731958762887, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=25.1184834123223, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26871; Mature: 26871
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYHWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKAL CCCEECCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLATAYVELFRNIPLIVQLFIWYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH RVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRLPGFIG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GK CC >Mature Secondary Structure MNYHWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKAL CCCEECCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLATAYVELFRNIPLIVQLFIWYFVMPELVPGGDYIKQMNPATAMFLCAMLCLGTFTAA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH RVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRLPGFIG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]