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The map label for this gene is ybhP [H]

Identifier: 17545188

GI number: 17545188

Start: 500625

End: 501371

Strand: Direct

Name: ybhP [H]

Synonym: RSc0469

Alternate gene names: 17545188

Gene position: 500625-501371 (Clockwise)

Preceding gene: 17545187

Following gene: 17545189

Centisome position: 13.47

GC content: 68.27

Gene sequence:

>747_bases
ATGCTGCGCCTGCGTGTCGCCACCTACAACATCCACAAGGGCGTGACCGGCATCGCGCGGCGCGTGCGGGTGCACGATGT
GCGGCAAGGGCTGCACACCATGGACGCCGACATCGTTTTCCTGCAGGAAGTGCAGGACCGCAACGACCGCCTGGTGGCCG
CTGAACTGTTCGACCCGCACTACACCCAGCTGCGATACCTGGCCACCGACGTGTACCCGCACACGGTGTACGGCCGCAAT
GCGGTGTACGACCACGGGCACCACGGCAACGCCATCCTGTCGCGCTATCCGATCCTGCTGTCGGAGAACCTCGACATTTC
CGACCATCGCTTCGAGCAGCGCGGGCTGCTGCATGCCGTCGCCGACCTGGGGTTTGGCGAGGTCCACCTGCTGTGCGCGC
ATTTCGGCCTGTTCGCACGCAGCCGCCGGCGGCAGGCCGAGGCGCTGATCGAGCGCGTGTGCTCGGTGGTGCCCATCGAT
GCGCCGCTGGTGGTGGCGGGCGACTTCAACGACTGGAACAACCGGCTCGATCGCGTCATCTGCCAGGCGCTGGGCGTCAC
CGAGGTGGCCGACAAGGCTGCCGGCGCGCGGCCGCTGCGCACCTTTCCGAGCCACCTGCCGTGGCTGCGGCTGGACCGCA
TCTATGTGCGCGGCTTCGAGATCGACCGCGCGCATGCGCTGACCGGCCGCGACTGGGCCCAGCGGTCCGATCACGTGCCC
CTGCTGGCGGAACTGTCGCGCTCATGA

Upstream 100 bases:

>100_bases
GCCGCCGCGCGCTGCTTCTCGCGCAGCAACGGCGAGGCGATCCTGCAGCTGCCCGCGCGCCTGGCCGACGCGGCCGCGCT
GGCAAAGGACCGGGCCTGAG

Downstream 100 bases:

>100_bases
AGGTCGCGCGCGATGCCGGGCCGTTGCGTTCGGAGTGGCGGCGGGGCAAGCCCCTGCCGGGCAACCGGATCGACCTGCTG
CACGGCGGCGCCGCGTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPHYTQLRYLATDVYPHTVYGRN
AVYDHGHHGNAILSRYPILLSENLDISDHRFEQRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPID
APLVVAGDFNDWNNRLDRVICQALGVTEVADKAAGARPLRTFPSHLPWLRLDRIYVRGFEIDRAHALTGRDWAQRSDHVP
LLAELSRS

Sequences:

>Translated_248_residues
MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPHYTQLRYLATDVYPHTVYGRN
AVYDHGHHGNAILSRYPILLSENLDISDHRFEQRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPID
APLVVAGDFNDWNNRLDRVICQALGVTEVADKAAGARPLRTFPSHLPWLRLDRIYVRGFEIDRAHALTGRDWAQRSDHVP
LLAELSRS
>Mature_248_residues
MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPHYTQLRYLATDVYPHTVYGRN
AVYDHGHHGNAILSRYPILLSENLDISDHRFEQRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPID
APLVVAGDFNDWNNRLDRVICQALGVTEVADKAAGARPLRTFPSHLPWLRLDRIYVRGFEIDRAHALTGRDWAQRSDHVP
LLAELSRS

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=247, Percent_Identity=40.8906882591093, Blast_Score=170, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28273; Mature: 28273

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPH
CEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCEEEEECCCCH
YTQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDISDHRFEQRGLLHAV
HHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHH
ADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPIDAPLVVAGDFNDWNNRLDRVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
CQALGVTEVADKAAGARPLRTFPSHLPWLRLDRIYVRGFEIDRAHALTGRDWAQRSDHVP
HHHHCHHHHHHHHCCCCCHHHHHCCCCHHEECEEEEEEEEECHHHCCCCCHHHHCCCCCC
LLAELSRS
HHHHHCCC
>Mature Secondary Structure
MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPH
CEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCEEEEECCCCH
YTQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDISDHRFEQRGLLHAV
HHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHH
ADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPIDAPLVVAGDFNDWNNRLDRVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
CQALGVTEVADKAAGARPLRTFPSHLPWLRLDRIYVRGFEIDRAHALTGRDWAQRSDHVP
HHHHCHHHHHHHHCCCCCHHHHHCCCCHHEECEEEEEEEEECHHHCCCCCHHHHCCCCCC
LLAELSRS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]