Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17231012
Identifier: 17231012
GI number: 17231012
Start: 4242265
End: 4242729
Strand: Reverse
Name: 17231012
Synonym: all3520
Alternate gene names: NA
Gene position: 4242729-4242265 (Counterclockwise)
Preceding gene: 17231013
Following gene: 17231011
Centisome position: 66.15
GC content: 42.8
Gene sequence:
>465_bases ATGGGTAGATGGACACCGCTAATTCTTATGGCCGGAGGCTTGGCAATTCTCATGGGAACATTGCTAGGCATTAACTTCCC AATGGGCGGCCAGCAACAAACAGCTAGTAACAATACTTCAACTAGTAATAATGCTCCAGGAGGCAAAGCATCGAAAGTAC TCCCAGCTAACATTAATGTTAATAGCTCCTCTGCCAATCGCAATCGCACCAATGCTACTACCAATGAAAACAGAAGTGGT GTAGCGCAAGATAATTTCAACACTAATACTGAAGAAAGAGGCAACAGCAATCAGGAAGAGCGCAGATCCACTGGTAACAG AACTAGTGTGGCTCAAAATAACAATTCCACTGATTCATCATCTCCTGACAATACATCAGATACTAGTACTACAGAAGTTC AATCAAGAGACACCGTATCTAGTGACACCAACCAAGCAAAAGAACCAATTCGTGCTTTGTGGTAA
Upstream 100 bases:
>100_bases TATTAGGTGATGTGAAGATAACAAAATTTGACGGATTTTGGGGTCAAGGTTCTCAGCTAGTGTGGCAACCAGAAGGTTAG GTTAACAAGGAGAAATCAAG
Downstream 100 bases:
>100_bases TGGAGTGCTGAGTGCTGTGAGTGGTAGCGGGGCGTTCATATTTTTGAATTTTGTAGCTTTAGCTTTCCTTTGCTACGCAA CGCTCGCGCGAACGGAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MGRWTPLILMAGGLAILMGTLLGINFPMGGQQQTASNNTSTSNNAPGGKASKVLPANINVNSSSANRNRTNATTNENRSG VAQDNFNTNTEERGNSNQEERRSTGNRTSVAQNNNSTDSSSPDNTSDTSTTEVQSRDTVSSDTNQAKEPIRALW
Sequences:
>Translated_154_residues MGRWTPLILMAGGLAILMGTLLGINFPMGGQQQTASNNTSTSNNAPGGKASKVLPANINVNSSSANRNRTNATTNENRSG VAQDNFNTNTEERGNSNQEERRSTGNRTSVAQNNNSTDSSSPDNTSDTSTTEVQSRDTVSSDTNQAKEPIRALW >Mature_153_residues GRWTPLILMAGGLAILMGTLLGINFPMGGQQQTASNNTSTSNNAPGGKASKVLPANINVNSSSANRNRTNATTNENRSGV AQDNFNTNTEERGNSNQEERRSTGNRTSVAQNNNSTDSSSPDNTSDTSTTEVQSRDTVSSDTNQAKEPIRALW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16363; Mature: 16231
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWTPLILMAGGLAILMGTLLGINFPMGGQQQTASNNTSTSNNAPGGKASKVLPANINV CCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC NSSSANRNRTNATTNENRSGVAQDNFNTNTEERGNSNQEERRSTGNRTSVAQNNNSTDSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCC SPDNTSDTSTTEVQSRDTVSSDTNQAKEPIRALW CCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GRWTPLILMAGGLAILMGTLLGINFPMGGQQQTASNNTSTSNNAPGGKASKVLPANINV CCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC NSSSANRNRTNATTNENRSGVAQDNFNTNTEERGNSNQEERRSTGNRTSVAQNNNSTDSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCC SPDNTSDTSTTEVQSRDTVSSDTNQAKEPIRALW CCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA