Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231010

Identifier: 17231010

GI number: 17231010

Start: 4239858

End: 4240013

Strand: Reverse

Name: 17231010

Synonym: asl3518

Alternate gene names: NA

Gene position: 4240013-4239858 (Counterclockwise)

Preceding gene: 17231011

Following gene: 17231009

Centisome position: 66.11

GC content: 53.21

Gene sequence:

>156_bases
ATGACAATTCACCCTTCGGGTGATGCTCGTTCCTCTCTACGAGACGCTGCGCGAACGCTAACGCCAGTTGCACCCTTAGG
GAAAGGCTTACGCCAACATGGGGAAACCCCCTACGTACCCGTCACTGGCTCACAACTGAAAACTGACCAAATGTAA

Upstream 100 bases:

>100_bases
CATGAAAACCTATGCCAGTGCTAGCTCACCAGTCACAGGTACGATTAGTTAGTCAATAGTCAATAGTCAATAGTCCATAT
GGACTATTGACCAATAAGTA

Downstream 100 bases:

>100_bases
CGATTTATCTCTGATTGTGTGAGTAAAAGATATAGGTCTTTATAAGATTAAATAAAATAATCAGAGCTAAGGAAATAATT
CATGCCCTATACAAACGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MTIHPSGDARSSLRDAARTLTPVAPLGKGLRQHGETPYVPVTGSQLKTDQM

Sequences:

>Translated_51_residues
MTIHPSGDARSSLRDAARTLTPVAPLGKGLRQHGETPYVPVTGSQLKTDQM
>Mature_50_residues
TIHPSGDARSSLRDAARTLTPVAPLGKGLRQHGETPYVPVTGSQLKTDQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5444; Mature: 5313

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHPSGDARSSLRDAARTLTPVAPLGKGLRQHGETPYVPVTGSQLKTDQM
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TIHPSGDARSSLRDAARTLTPVAPLGKGLRQHGETPYVPVTGSQLKTDQM
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA