Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17230954
Identifier: 17230954
GI number: 17230954
Start: 4172791
End: 4173573
Strand: Reverse
Name: 17230954
Synonym: all3462
Alternate gene names: NA
Gene position: 4173573-4172791 (Counterclockwise)
Preceding gene: 17230957
Following gene: 17230953
Centisome position: 65.07
GC content: 55.68
Gene sequence:
>783_bases GTGTTCACTGCTCACTGTTCACCGTTAGAAAAACCGATGAACCAATCAATCAAAGTCATCCTCATTACCGCCCTCGTCAC TGCTGTCTCTGGTAGACCTGCTGTAGCGCAGTTTGGCGCACCCAGTAGCCTCAGCTTCAGCAACATGAACGCCTACCTCA GCGTTCAGAAAAATGCTGCACTGGTGCGTCAAGCTCAGTCAAATCTTAACAGCATCAACCGACGCAACAACAGCAGTCAG CGCGCCCAAGCCACCGCCCGCACCCAAGCCCAAACTGCCCCAAGAACCACCTTTCGACCAAGCTCGCAGCGCTTGCTGGT GACGCAATTCGCCCGCAGCTTGAGCAGTGACCCCACTATAGTAAGCCAGTCAACCAAAGCCTTCACAGAGGGCTTTAAAG CCTTCGAGGCAGAAGCCCGGCGTTTAGGCCGCCCCAACAACGTGGCGATGGCCTTCGCCTACTTGGTGGGGGTTTGCTAC ATGGTACACTACGGCGAAGAACCCACCGAAACCGCGCTGATGAACCTCCAAGCAAACAGCGACGCGGCCTTCGGTTCCTC GACGGCCTTCAAAGCACTGAACAACCAAGAGCGCCAAAAACTCTATGAGACCTTTGTACTGATGGCGACCCTGCCTTTGG CAGGTTACACGGTAGCAACCGAGCAGAACGACCAAGAGTTGCTCAATACCTACCGCAATATTGCCGGGGTAGCTCTTGAG ACTGCCTTGGGGGTGCGACCAGATCGGTTACGGTTCACGGCAACGGGGTTGGAACTGCGCTGA
Upstream 100 bases:
>100_bases AAAGCGATTTGAGTTAGTTGTCTATGGTAGTTATTTGATGATTGCTATGGCTTGCCCAAGAAAACAACTTCATAACAAAA TTTTAAATATTTATTGATGA
Downstream 100 bases:
>100_bases CATACTCCCACACTGATGCAAGCATACAAAGATGGTATTAATTTTGCGGCGATTGTCAGCGTGAGGCGACGATGCTCCGC CCCACCGTAGGCGATCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MFTAHCSPLEKPMNQSIKVILITALVTAVSGRPAVAQFGAPSSLSFSNMNAYLSVQKNAALVRQAQSNLNSINRRNNSSQ RAQATARTQAQTAPRTTFRPSSQRLLVTQFARSLSSDPTIVSQSTKAFTEGFKAFEAEARRLGRPNNVAMAFAYLVGVCY MVHYGEEPTETALMNLQANSDAAFGSSTAFKALNNQERQKLYETFVLMATLPLAGYTVATEQNDQELLNTYRNIAGVALE TALGVRPDRLRFTATGLELR
Sequences:
>Translated_260_residues MFTAHCSPLEKPMNQSIKVILITALVTAVSGRPAVAQFGAPSSLSFSNMNAYLSVQKNAALVRQAQSNLNSINRRNNSSQ RAQATARTQAQTAPRTTFRPSSQRLLVTQFARSLSSDPTIVSQSTKAFTEGFKAFEAEARRLGRPNNVAMAFAYLVGVCY MVHYGEEPTETALMNLQANSDAAFGSSTAFKALNNQERQKLYETFVLMATLPLAGYTVATEQNDQELLNTYRNIAGVALE TALGVRPDRLRFTATGLELR >Mature_260_residues MFTAHCSPLEKPMNQSIKVILITALVTAVSGRPAVAQFGAPSSLSFSNMNAYLSVQKNAALVRQAQSNLNSINRRNNSSQ RAQATARTQAQTAPRTTFRPSSQRLLVTQFARSLSSDPTIVSQSTKAFTEGFKAFEAEARRLGRPNNVAMAFAYLVGVCY MVHYGEEPTETALMNLQANSDAAFGSSTAFKALNNQERQKLYETFVLMATLPLAGYTVATEQNDQELLNTYRNIAGVALE TALGVRPDRLRFTATGLELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28412; Mature: 28412
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTAHCSPLEKPMNQSIKVILITALVTAVSGRPAVAQFGAPSSLSFSNMNAYLSVQKNAA CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEHHHHH LVRQAQSNLNSINRRNNSSQRAQATARTQAQTAPRTTFRPSSQRLLVTQFARSLSSDPTI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCE VSQSTKAFTEGFKAFEAEARRLGRPNNVAMAFAYLVGVCYMVHYGEEPTETALMNLQANS ECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCC DAAFGSSTAFKALNNQERQKLYETFVLMATLPLAGYTVATEQNDQELLNTYRNIAGVALE CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH TALGVRPDRLRFTATGLELR HHHCCCCCCEEEEECCCCCC >Mature Secondary Structure MFTAHCSPLEKPMNQSIKVILITALVTAVSGRPAVAQFGAPSSLSFSNMNAYLSVQKNAA CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEHHHHH LVRQAQSNLNSINRRNNSSQRAQATARTQAQTAPRTTFRPSSQRLLVTQFARSLSSDPTI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCE VSQSTKAFTEGFKAFEAEARRLGRPNNVAMAFAYLVGVCYMVHYGEEPTETALMNLQANS ECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCC DAAFGSSTAFKALNNQERQKLYETFVLMATLPLAGYTVATEQNDQELLNTYRNIAGVALE CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH TALGVRPDRLRFTATGLELR HHHCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA